Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03172 ATGACGAATCGCGCCAATGCTGGCCACCTCAGAATTTTCCATGAGTCGTGTTGCACAATATTGCTTGTGTCGTTCAAACTTCAAACATTGCAATTCAAGATTAGAATTTTCGTCAAGATGGATTCTGCTGGGATGATAACTGGAGCCAAGTACGAGTGCTTGCTTTTTGACATGGATGACACTCTGTACCCTTTGAGCTCAGGTCTCAATCTGGCATGTCGCAAGAACATACAAGATTATATGTTGGAACGGCTGCATATTGAAGAAAGTGAAGTGCCAAAGATGTGCTTGGACTTGTATCAGGAATATGGGACAACTATGGCAGGATTAAAGGCCCTAGGTTATGAGTTTGACGATGATAAGTTTCATGCCTATGCGCATGGAAGATTGCCGTACGATCAATTGAAGCCTGATCCAGTGTTAAGGAACCTTCTGCTTTCCATGCCTCAGCGTAAAATAATATTTACCAATGCAGATCAAGCACATGCTATTCGAGTTCTCAACAGACTGAGCTTGGAAGATTGTTTTGAAGGCATTATTTGCTTTGAAACCCTCAACCCTCCCAAACAGGCAGATCTCACAGGGAGTATAAATGACTCTGATTCAACTGAGAATGGATGTTTCTGTCACAAGTCACCAATCCTCTGCAAACCCTCTGTGGAAGCCATGAAGGCTGCTATTCGCATTGCTAATGTTGATACTAGGAAAACGATTTTCTTCGACGACAGTGTTCGAAATATCGCAAGTGGGAAATCAGCTGGACTTCACACAGTTATTGTGGGCAAGTCAGATCTAGTTCCTGGTGCAGACCATGCCCTGGGTAGTAtccataacataaaagaagcATTACCTGAAATATGGGAGGTTGAAGGTGAACAACAGCAGGTGCTTCAGTCCCCAGCAGTTGCAACCATGGTCCTTGCATA 926 0.4298 MTNRANAGHLRIFHESCCTILLVSFKLQTLQFKIRIFVKMDSAGMITGAKYECLLFDMDDTLYPLSSGLNLACRKNIQDYMLERLHIEESEVPKMCLDLYQEYGTTMAGLKALGYEFDDDKFHAYAHGRLPYDQLKPDPVLRNLLLSMPQRKIIFTNADQAHAIRVLNRLSLEDCFEGIICFETLNPPKQADLTGSINDSDSTENGCFCHKSPILCKPSVEAMKAAIRIANVDTRKTIFFDDSVRNIASGKSAGLHTVIVGKSDLVPGADHALGSIHNIKEALPEIWEVEGEQQQVLQSPAVATMVLA 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03172 308 Gene3D - 117 287 IPR023214 -
Bva04g03172 308 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 47 308 - -
Bva04g03172 308 PANTHER OS07G0634400 PROTEIN 47 308 - -
Bva04g03172 308 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 52 260 IPR010237 -
Bva04g03172 308 SFLD Haloacid Dehalogenase 49 289 - -
Bva04g03172 308 SFLD C1.5.3: 5'-Nucleotidase Like 49 289 IPR010237 -
Bva04g03172 308 CDD HAD_5NT 53 261 IPR010237 -
Bva04g03172 308 SUPERFAMILY HAD-like 50 285 IPR036412 -
Bva04g03172 308 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 214 260 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03172 Bva-Chr4 25927132 25929900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03172 K18551 - gmx:100814291 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03172 04 25927132 25929900 Bva13g03156 13 22126475 22129389 BWGD