Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03155 ATGATAGAAAATTATAAGCCGGTAAAAGAAACTGAGCTGTCAATACTTGACCCGTTGACCGTGCAGCGTAACTTCGGGCTTAGGCGATTACAAATCGGTCGTTTGCTAGAACACCGTCTGCTCCCCCTCCGGCATCTTTGTAAGAGGTGGACATCGAGTATGGCGGGGGGTCAAGCAAAAAATCCTGCATCTGGTGGTTCGAAGAAGAAGGAGGTGAAGAAAGAAACTGGTTTAGGACTTTCACATCGGAAGGCAGACAACTTTGGGGAGTGGTATTCTGAGGTGGTTGTCAATGCAGAAATGATTGAGTACTATGATATTTCTGGCTGCTATATTCTGAGGCCATGGGCTATGTCAATATGGGAGATCATGCAAGCATTCTTTGAtgtagagataaaaaaaatgaaaatcaagaaCTGCTACTTCCCCTTGTTCGTGTCTCCGGGTGttctacaaaaagaaaaggatcatGTCGAGGGTTTCGCTCCAGAGGTTGCTTGGGTGACAAAGTCTGGAGAATCTGAGTTAGAAATTCCTATTGCAATTCGTCCAACTAGCGAGACTGTCATGTATCCCTACTACTCTAAATGGATAAGGGGACACCGTGACTTGCCTTTGAAACTTAATCAGTGGTGCAATGTTGTTAGATGGGAGTTCAGCAATCCCACTCCATTCATCAGGAGCCGTGAGTTTCTTTGGCAGGAAGGTCATACTGCCTTTGCAACAAAAGAGGAGGCAGACACAGAGGTCCTTGAGATATTGGAATTGTATAGACGTATATATGAAGAATACTTGGCAATTCCTGTCATAAAGGGTAAGAAGAGTGAGCTGGAGAAGTTTGCTGGTGGACTGTACACTACCAGTGTTGAGGCATTCATTCCAAACACTGGTCGTGGTATTCAAGGTGCAACTTCTCATTGCCTTGGCCaaaattttgctaaaatgtttgagatcaactttgaaaatgAGAAGGGAGAGAAAGCAATGGCTTGGCAGAACTCATGGGCTTATAGTACTCGAACAATTGGTGTGATGGTGATGGTTCATGGGGATGACAAAGGATTGGTGTTGCCACCTAAAGTTGCATCAGTCCAAGTTATTGTGATTCCTGTGCCTTACAAAGATGCTAATACACAAGGTATTTTTGATGCCTGTTCAGAAACTGTGAATACCTTGTGTGAAGCAGGCATTTGTGCTGAGTCAGACTTCAGAGATAATTATTCTCCTGGTTGGAAGTATTCACACTGGGAAATGAAAGGCGTTCCTCTGAGGATTGAAATTGGGCCAAAGGATTTGGCAAATCAGCAGGTGCGTGTAGTTCGGCGTGATAATTCTGCAAAAATAGACATACCTAAGGCTGATTTGGTTGAAAAAGTCAAAGAGTTGCTGCATAATATCCAACAGAACCTGTTTGACGCTGCAAAACAAAAACGAGATGCTTGCATTCAGGTGATACATACTTGGGATGAATTCGTGGATGCATTGAACcaaaggaaaatgattttaGCTCCTTGGTGTGACGAGGAGGAAGTGGAAGTAGATGTGAAAGCTAGGACTAAGGGCGAGATGGGAGCAGCTAAAACCCTTTGTACACCATTTGATCAGCCAGAACTCCCAGAAGGTACTAAGTGCTTTGCCTCTGGCAAGCCTGCTAAGAAGTGGACATACTGGGGGAGAAGTTACTA 1685 0.4226 MIENYKPVKETELSILDPLTVQRNFGLRRLQIGRLLEHRLLPLRHLCKRWTSSMAGGQAKNPASGGSKKKEVKKETGLGLSHRKADNFGEWYSEVVVNAEMIEYYDISGCYILRPWAMSIWEIMQAFFDVEIKKMKIKNCYFPLFVSPGVLQKEKDHVEGFAPEVAWVTKSGESELEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADTEVLEILELYRRIYEEYLAIPVIKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKAMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDANTQGIFDACSETVNTLCEAGICAESDFRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANQQVRVVRRDNSAKIDIPKADLVEKVKELLHNIQQNLFDAAKQKRDACIQVIHTWDEFVDALNQRKMILAPWCDEEEVEVDVKARTKGEMGAAKTLCTPFDQPELPEGTKCFASGKPAKKWTYWGRSY 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03155 561 Pfam Anticodon binding domain 365 462 IPR004154 -
Bva04g03155 561 Gene3D - 359 479 IPR036621 -
Bva04g03155 561 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 143 358 IPR006195 -
Bva04g03155 561 Pfam Prolyl-tRNA synthetase, C-terminal 488 561 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 Hamap Proline--tRNA ligase [proS]. 81 561 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 180 346 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bva04g03155 561 SUPERFAMILY C-terminal domain of ProRS 484 561 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 CDD ProRS_anticodon_zinc 354 561 - -
Bva04g03155 561 TIGRFAM proS_fam_I: proline--tRNA ligase 83 561 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 PRINTS Prolyl-tRNA synthetase signature 139 157 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 PRINTS Prolyl-tRNA synthetase signature 220 231 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 PRINTS Prolyl-tRNA synthetase signature 180 191 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 PRINTS Prolyl-tRNA synthetase signature 210 218 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 SMART ProRS_C_1_2 488 561 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 PANTHER PROLINE--TRNA LIGASE, CYTOPLASMIC-LIKE 61 561 - -
Bva04g03155 561 PANTHER PROLYL-TRNA SYNTHETASE 61 561 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 CDD ProRS_core_arch_euk 87 348 IPR033721 -
Bva04g03155 561 Gene3D Bira Bifunctional Protein; Domain 2 81 358 IPR045864 -
Bva04g03155 561 MobiDBLite consensus disorder prediction 54 78 - -
Bva04g03155 561 SUPERFAMILY Class II aaRS ABD-related 353 479 - -
Bva04g03155 561 Gene3D - 482 561 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Bva04g03155 561 SUPERFAMILY Class II aaRS and biotin synthetases 86 352 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03155 Bva-Chr4 25833124 25839028 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03155 K01881 - gmx:100782067 958.747