Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03124 atggtcGTGCCTTCTCCAACTTCAATGATGAgaagcaagaaaacaaaagcccTAGGAATTCCGGCGATCGACCTGTCCGCGGAAAGGTCAGAGTTATCGGAATTAGTGGTAAAAGCTAGCGAGGAATATGGTTTCTTCAAGTTGGTGAACCACGGCGTGGCCAGAGAGGTTATTTCAACGTTGGAAGAGGAAGGAAGAAAGTTCTTTGCCAAGAGCACCGCAGAGAAGCAACATGCCGGGCCTGCTACCCCTTTTGGTTATGGTTGCAGAAACATTGGCAGAAATGGCGATATGGGTGAGCTCGagtatcttcttcttcatacCACTCCTCTCTGCATCTCTCAGAGATCAGAAACCATCTCAAATGATCCAACCAAGTTCGGCCGAGCCGTGAGTGATTATGTAGACGCAGCTAGGGAACTATCATGTGAGATTCTTGATCGAATGGCGGAGGGCTTGTGGGTTCCCGACAAATTTGCGCTGAGCAGGCTGATCAGAGACGTTAACAGCGACTCACTCCTGAGGATCAATCACTACCCAACGAAGAAGTGGGACCCATTAGAGCTTGACGAAAATCAAACCATCAATAGTGGAGTGGGGTTTGGGGAGCATTCTGACCCTCAGATATTGACAATCATGAGATCAAACGACGTGGGCGGGCTTCAGATCTGTACCCACGACGGGCTGTGGATCCCTGTCCCCCCCGATCCAAATGAATTCTTCGTGATGGTTGGTGATGCACTGCAGGTACTGACGAATGGAAGGTTGAGAAGCGTGAGGCATAGAGTATTGAGCAACACAAGGAAGGCAAGAATGTCAATCATGTACTTTGGAGCACCGGCTTTAAACTGGCGGATTGCTCCTCTGCCAAAGACGGTAACGGCTCATAATCCACATCAGTATATACCCTTCACCTGGGCTCAGTACAAGCAAGCAGCTTACTCTCTGCGACTAGGAGACTCACGCCTTGACCTCTTCAAGGCTAAAGGCTA 992 0.4748 MVVPSPTSMMRSKKTKALGIPAIDLSAERSELSELVVKASEEYGFFKLVNHGVAREVISTLEEEGRKFFAKSTAEKQHAGPATPFGYGCRNIGRNGDMGELEYLLLHTTPLCISQRSETISNDPTKFGRAVSDYVDAARELSCEILDRMAEGLWVPDKFALSRLIRDVNSDSLLRINHYPTKKWDPLELDENQTINSGVGFGEHSDPQILTIMRSNDVGGLQICTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRLRSVRHRVLSNTRKARMSIMYFGAPALNWRIAPLPKTVTAHNPHQYIPFTWAQYKQAAYSLRLGDSRLDLFKAKG 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03124 330 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 4 328 - -
Bva04g03124 330 SUPERFAMILY Clavaminate synthase-like 10 320 - -
Bva04g03124 330 Pfam 2OG-Fe(II) oxygenase superfamily 171 278 IPR044861 -
Bva04g03124 330 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 328 - -
Bva04g03124 330 Pfam non-haem dioxygenase in morphine synthesis N-terminal 20 88 IPR026992 -
Bva04g03124 330 PRINTS Isopenicillin N synthase signature 204 225 - -
Bva04g03124 330 PRINTS Isopenicillin N synthase signature 36 53 - -
Bva04g03124 330 PRINTS Isopenicillin N synthase signature 240 266 - -
Bva04g03124 330 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 169 280 IPR005123 -
Bva04g03124 330 Gene3D - 3 317 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03124 Bva-Chr4 25712614 25714847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03124 3 327 Glycosyltransferase AT5G59530 27.616 3.64e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03124 K04125 - gmx:100779525 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03124 04 25712614 25714847 Bva13g03091 13 21822154 21825426 BWGD