Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03123 ATGGATGCCAAGGACATCCTAGGCCTGCCAAAAACGTCATTGCCTGCCCAAGAGAAAAAGCCTCGACCCCAAAAGGACTCGCAGAGAAAACCAGATGGCATTTCGCGGGAGGTGTATGCGCTCACGGGTGGTTTGACACCTCTTATGCCTGCTATTGATCCGTcccaattgaaaaaaaagcCTCCAGTAGATGAGAAGATAACTTGGCAATGGCTTCCTTTTACAAGTTCTGCTCGCAAAGACAATCTCCAGCTTTACCACTGGGTCCGCGTTGTCAATGGTGTTCCTCCGACTGGCGACTATTCTTTCGCCAAGTATAACAAGTCTGTTGACGTTATCAAATACACAGATGAGGAGTATGAGAAGTATTTGAAAGATCCCACTTGGACCAAGGAGGAGACAGATCTACTGTTTGACTTGTGTGAGAGGTTTGATCTCCGATTTGTTGCGATAGCTGACAGATTCCCATCATCTTGGACTGTAGAGGAATTGAAAGATCGGTATTATAGTGCATCTCGAGCTATACTACTTGCTAGGGCTGCATCTCCTGCAGATGTTGCAACACATCCTCTTGTTAAGGAACCGTATAATGTTTCACAAGAGATAGAGCGGAAGCGAGCACTGTCCATGTACCTCTCTATAACAAAGCAACAAGATCGTAAAGATGCAGAGgtTCTTGCCGAAGCAAAAAGAATATCTGAGTCACGGATGCCTGCAAAGGTTGCTGAGGAGCCTGAGTTGGCTGTTGCGGCAAATGCTGCTGCTGAAGTTACTGAGAGGGCTATACCTGGTGACACTCCATCTAAAGTTCAGCTTCCGTCAACAGTTGTGCCTTCGGCATTAACAGCAGATAATGCATCTACTCTAGCTTCTCTTCGCATGCTTCGTGTTTATCTGAGAACATATGCACTTGAGCAAATGGTGCAAGCTGCAAGCTCATCAGCTGGACTTCGGACTATCAAGCGGGTTGAGCAAACTTTGCAAGAACTTGGGGTTAATTTGAAACCAAGGGTTCCGACAAAAGCTGTTTGTGCAGAGCATCttgaattaagaaaagaaatactaaCTCTGCTGAATCTTCAGAAACAGCTGCAATATAAGGAAGCTGAAGGCTCATCTTTTCGTGAAGGTTCATATACTGAAACACCAAGCACCCCAAAGCATTGTGGTGGTGATCAGGATCGGACATTTATTCCAGACTCGATGAGTTTTGGAGGTGAAAGGGTTGGCAAAAGGGAGCAAAAACGCAAGGCACCTGGACGGCTATCAGAAGCTCCATCGTTGCCAGCTCAGTCTAAAAGACCTAGAAAACTTAAGGCCTCGGATTTATA 1331 0.4485 MDAKDILGLPKTSLPAQEKKPRPQKDSQRKPDGISREVYALTGGLTPLMPAIDPSQLKKKPPVDEKITWQWLPFTSSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVIKYTDEEYEKYLKDPTWTKEETDLLFDLCERFDLRFVAIADRFPSSWTVEELKDRYYSASRAILLARAASPADVATHPLVKEPYNVSQEIERKRALSMYLSITKQQDRKDAEVLAEAKRISESRMPAKVAEEPELAVAANAAAEVTERAIPGDTPSKVQLPSTVVPSALTADNASTLASLRMLRVYLRTYALEQMVQAASSSAGLRTIKRVEQTLQELGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAEGSSFREGSYTETPSTPKHCGGDQDRTFIPDSMSFGGERVGKREQKRKAPGRLSEAPSLPAQSKRPRKLKASDL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03123 443 MobiDBLite consensus disorder prediction 18 33 - -
Bva04g03123 443 SUPERFAMILY Homeodomain-like 125 175 IPR009057 -
Bva04g03123 443 MobiDBLite consensus disorder prediction 1 35 - -
Bva04g03123 443 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 443 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Bva04g03123 443 MobiDBLite consensus disorder prediction 371 443 - -
Bva04g03123 443 Gene3D - 98 184 - -
Bva04g03123 443 MobiDBLite consensus disorder prediction 375 389 - -
Bva04g03123 443 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Bva04g03123 443 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 313 376 IPR008468 GO:0005634|GO:0045892
Bva04g03123 443 PANTHER BNAA04G26950D PROTEIN 2 443 - -
Bva04g03123 443 MobiDBLite consensus disorder prediction 406 420 - -
Bva04g03123 443 SMART sant 125 174 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03123 Bva-Chr4 25703923 25708996 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03123 K11324 - qsu:112038673 694.115