Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03122 ATGGCCATCATTGCAGCCTCAGGATTGCCCAAAACCGCAGCTTCTTCAATAATCAAAGGCACAGCGAAATCCCATCAATACCCGGTTTTCATTTCTCCGAAACAATACAAATTCCTTCCCAACAAAACCACAATCAGAATAGCCTCCAACCAAACAAGTGCGGCGCCCACCGGCTCTTCTCCCAGTCCCGGGTTATACTCTGCCCATCAATTTGATCTTAACGTTCCTAACGTCGACCTAGTTCTCGAGGATGTTCGCCCTTACCTCATCGCTGATGGTGGCAACGTCGAAGTTGTGTCCGTTGAAGATGGCGTTATTTCTCTCAAACTCCAAGGAGCATGTGGAAGCTGTCCTAGctcaacaacaacaatgaaGATGGGGATTGAACGTGTACTTAAGGAAAAATTTGGAGATCAAGTCAAGGATATACGGCAAGTGTATGATGAGGAAAATAAGGAGATAACTGTTGAGGCCGTAAATAATCATCTTGATATCCTGAGACCGGCCATTAAGAATTTTGGTGGCAGTGTGGAAGTGTTATCAGTTGAAGGCGCGGATTGCCTTGTGAAGTATGAGGGGCCTGAGTCTATTGGATCAGGAATCAAAGCAGCAATCAAGGAGAAGTTTCCAGACATTGTAAATGTTGTGTTCTGTAGCTA 659 0.4431 MAIIAASGLPKTAASSIIKGTAKSHQYPVFISPKQYKFLPNKTTIRIASNQTSAAPTGSSPSPGLYSAHQFDLNVPNVDLVLEDVRPYLIADGGNVEVVSVEDGVISLKLQGACGSCPSSTTTMKMGIERVLKEKFGDQVKDIRQVYDEENKEITVEAVNNHLDILRPAIKNFGGSVEVLSVEGADCLVKYEGPESIGSGIKAAIKEKFPDIVNVVFCS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03122 219 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 155 217 IPR034904 -
Bva04g03122 219 Pfam NifU-like domain 79 139 IPR001075 GO:0005506|GO:0016226|GO:0051536
Bva04g03122 219 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 17 217 - -
Bva04g03122 219 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 77 150 IPR034904 -
Bva04g03122 219 Gene3D - 70 153 IPR034904 -
Bva04g03122 219 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 17 217 - -
Bva04g03122 219 Gene3D - 154 218 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03122 Bva-Chr4 25701078 25702857 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03122 K22074 - mnt:21401733 303.523