Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03115 ATGCACATGCCCAGATTTCAACTGGGGACATCTGATCACCATGTTCCTCCTTGTTTATCAACACAACTGACATTTTGGCAAGCGGGAAGTTCGTTTTCGTCGTCTTCATCCATCGTAAGCATTGCAGGAGTTCAGTATACACAGGATTTTTATATGGCAAATAGTCCCAATCCAGACACTGACGACGATTTTAGTGAGCTTTATAAGGAGTATACTGGCCCTCCAGGGTCTGCTGCTACTAATACCCAGGAAAGAGCAAAGTCAAACAAAAGGCCTCGTGCAGGATCTGATGCGGAGGAGGAATCTCGTGACCCAAATGCTGTCCCAACCGATTTCACTAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACCGAGAGgaattggaagaaaaggaaagaagaagaaatgatatGCAAGCTGTGTGGAGAATCAGGGCATTTCACTCAGGGTTGTCCATCCACTCTTGGAGCAAATCGAAATTCTCAAGATTTTTTTGAAAGGATACCTGCAAGAGACAAGCATGTAAGAGCATTGTTCACAGAGAAAGTCATAAGCAAGATTGAAAGGGACATTGGCTGCACAATAAAGATGGATGAGAAATTTCTTATTGTAAGTGGTAAGGATAGGTTAATTTTGGCAAAAGGTGTTGATGCTGTGCACAAGATAAAAGAGGAGGGCGATCAAAAGGGCCATTCTAGTTCTCATTTATCCCGATCTAGATCACCTGAGAGAAGTCCTGTTGGTGCTCGGTTTCAGCGTTCTGAACCCAAAAAGTCTTATTCTGGACCTCGAAATACATCCCGCTTTCAACAAAGGTTTGGTAGGCAAGAGAAGGTTATTGAAGACCGTGTGGGAGAGGACTTTCAAAAGTTTGGAAGAGGTTCTCCACAAGGTAGGGACAGCGTAGGATATGTTTTCGGCATCCTTAGAAAGCTGCAAGAGCTTATGGAAGTAGTGGAGCCAGAGGTCGTTCAAGCCATTCAAGGTCTCCAAGACAAGTCCCATATACAGACTTTAGAAGAATTTGAGCTGGAGTATAAGAGGGAGGCTATGGCGTTTATGAAAATCCGTGACAgagaagaagttgaagaaaatttcaagcatCGTGAGgcTTTGAAAGATACGAGGGAGAACTACATGAGCAAAGTCGCTAAGCTGAGGGCCATACATGCAAAACAATGGGAAgaatttcttcatcttgatGCCCAGAGGCAACAACAGCAGGCAATTCAACAGATGCCCGTGTTTAGTTTTGGGGGTTATAAACAACAGAGCTTTTCTGAACATGATGGGTCCACTGCCAACCCTCACTATGTTGGGGCCAATTTACCCTTGCAGTCGCGGAACAGTTACTCTGACCCTAAGGAAAACTATCCCACTAGACCCCCTGATAACTTTGGCGAATTTCAGAGGCGTGGAGATTTCGCAAGAGCTTACAACagatatta 1457 0.4248 MHMPRFQLGTSDHHVPPCLSTQLTFWQAGSSFSSSSSIVSIAGVQYTQDFYMANSPNPDTDDDFSELYKEYTGPPGSAATNTQERAKSNKRPRAGSDAEEESRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRNSQDFFERIPARDKHVRALFTEKVISKIERDIGCTIKMDEKFLIVSGKDRLILAKGVDAVHKIKEEGDQKGHSSSHLSRSRSPERSPVGARFQRSEPKKSYSGPRNTSRFQQRFGRQEKVIEDRVGEDFQKFGRGSPQGRDSVGYVFGILRKLQELMEVVEPEVVQAIQGLQDKSHIQTLEEFELEYKREAMAFMKIRDREEVEENFKHREALKDTRENYMSKVAKLRAIHAKQWEEFLHLDAQRQQQQAIQQMPVFSFGGYKQQSFSEHDGSTANPHYVGANLPLQSRNSYSDPKENYPTRPPDNFGEFQRRGDFARAYNRY 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03115 485 PANTHER OS01G0252900 PROTEIN 52 485 - -
Bva04g03115 485 SUPERFAMILY Retrovirus zinc finger-like domains 128 160 IPR036875 GO:0003676|GO:0008270
Bva04g03115 485 MobiDBLite consensus disorder prediction 226 276 - -
Bva04g03115 485 MobiDBLite consensus disorder prediction 53 119 - -
Bva04g03115 485 MobiDBLite consensus disorder prediction 261 276 - -
Bva04g03115 485 ProSiteProfiles Zinc finger CCHC-type profile. 141 156 IPR001878 GO:0003676|GO:0008270
Bva04g03115 485 MobiDBLite consensus disorder prediction 442 459 - -
Bva04g03115 485 PANTHER OS01G0252900 PROTEIN 52 485 - -
Bva04g03115 485 MobiDBLite consensus disorder prediction 427 473 - -
Bva04g03115 485 MobiDBLite consensus disorder prediction 226 241 - -
Bva04g03115 485 MobiDBLite consensus disorder prediction 86 106 - -
Bva04g03115 485 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03115 Bva-Chr4 25669138 25672886 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03115 - - gmx:100806099 611.683