Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03110 ATGGCTCCTCCAAATGACCCAGTAATTCCTAGCTTGAAACTTCTGCGGTCTGATCCTCTGGAAAAGATTTTTGATTTGTGTGACGGTAAGCTCACTGTTAGAGGCGTGCCATTGCTAACACGAGTCCCTGAGAATGTCTCTTTGAGCCCATTCTCTCGTGCATGTCAAAACTCTGATTCTTCACTTCCACTGCTTCAGCTTGTCCTTGCCCTGTCTCACAGGGGTGCGTTCCTTGGGTTCTCTCAGGAACAGCCCTCTGATAGGCTGATAAACTCCTTGGGTAGATTCAGTGATAGGAATTTTCTGAGCATCTTTAGGTTCAAAACATGGTGGTCTACCCAGTGGGTGGGAACTTGTGGTTCAGATTTACAGATGGAAACCCAGTGGATTCTCTTTGATCTTCCTGAAATAAAGTCCTATGCCATAATCATTCCAATCATTGAGGGCAGTTTCAGGTCTGCTCTTCACCCTGGCTCTGATGGGCATGTCCTGATTTGCGCTGAAAGTGGTTCTTCCCAAGTGAAGTCATCAAATTTTGATGCTATTGCTTATATTCACTTGTCTGAAAATCCCTACAATCTCATGAAAGAGGCTTATAGTTCCCTGAGAGTTCACCTCAACACGTTTAAGCTCTTAGAAGAGAAAGCCACCCCAAATCTGATTGACAAATTTGGTTGGTGCACTTGGGATTCCTTCTACTTAACCGTAGACCCAGTTGGAGTTTGGCATGGAGTCAAAGGTTTCGTTGAGGCTGGTTTCTCTCCAAGGTTTATTATCATTGACGATGGTTGGCAGAGTATCAATCTGGACGATGATGACCCCAACGAAGATACCAAAAACCTCGTACTGGGAGGTCAACAAATGACTGCAAGGCTTCACAGGCTCGATGAAGGTGACAAGTTCAAGAAATACCAAGGTGGTCTCATGTTGGGTCCAAATGCTCTATCTTTCGACCCAAAGAAGATCAAAACATTGATCGGGCTAGGAATAAAGCTGGAGCGTTTGGAGAAGGAACGTGACGAAGCCTTACAATCTGGGGATCCCAATCTGCCACAGATTGAAGCGAAGATCAACAAGGTGAAGCAAGAAATAGATTATTTGTTTGGGGGAGAGGGAAACAGCAATTCAAAGAAAGAATGTGAAAGCAGCAATTCAGATAACTATGGGTTGAAGGCCTTCACAAGGGATTTGAGGTCAAAATTCAAAGGCTTGGATGACATTTATGTTTGGCATGCACTGTGTGGCGCATGGGGTGGGGTGAGGCCAGGAACAACACACCTCAATTCCAAAATTGTTCCCTGCAAACTCTCTCCTGGGCTTGATGGAACAATGCACGATCTTGCTGTGGTTAACATCGTTAAAGGTTCTATTGGGCTTGTTCATCCTGACCAAGCCAACGATCTCTATGACTCTATGCACTCTCACCTTGCCAAATCTGGTGTTACAGGGGTCAAAGTGGACGTCATTCATTGTCTTGAGTATGTGTCGGAGGAATATGGAGGCAGAGTGGAACTAGCCAAGGCCTATTATGATGGGCTGTCAAAATCCATTGAGAAGAACTTCAATGGAACTGGAATCATCGCTAGTATGCAGCAATGCAATGACTTTTTCTTCCTTGGCTCGAAACAGATATCCATGGCAAGAGTTGGTGATGACTTTTGGTTCCAAGATCCTAATGGGGACCCAATGGGAGTGTTCTGGCTGCAAGGGCTTCATGTGATTCACTGTTCCTATAATAGCTTGTGGATGGGGCAGTTTATACACCCTGATTGGGACATGTTCCAAACAGACCATGTGTGTGCCAAGTTCCATGCAGGTTCAAGGGCCATTTCTGGTGGTCCTGTCTATTTGAGTGACAGTGTTGGTTCTCATGATTTTAATCTCATTAAGAAGCTTGTCTATCCTGATGGCACCATCCCCAAATGCATATACTTTCCCCTTCCAACCAGAGACTGCCTCTTCAAGAACCCTCTTTTTGATCAGAAGACTGTCCTCAAGCTCTGGAACTTAaataagTATGGAGGGGTGATTGGTGCTTTCAACTGCCAAGGTGCTGGCTGGGACACCAAGACACACAGGTTCAGGGGCTTCCCTGAGTGCTACAAGCCAGTGACTACTTCAGTTCATGTTTCTGAGATTGAATGGGACCAGAAGGTTGAAGCTGTTGAAATGGGTAAAGCTGAAGAGTATGTAGTGTACCTCAATCAAGCTGAGGATCTGCACTTAATATCCCCCAAGTCTCCACCATTCCCAATTACCATCAATCCTTCTTCCTTTGAGCTCTTCAGCTTTGTACCAGTTACAAAGCTAAAGGGTACAATCAAGTTTGCACCAATTGGGCTACCCAACATGTTCAACAGTGGAGGGACAATCCAAGAGTTGGAATGCAGTAAGATTGGTGCCAAGCTCAAGGTTAAAGGTAGTGGAGTTTTCCTTGCTTACGCCAATGAATCACCAAAGAAATGTCAGTTGAATGGTGCAGAGGTGGCTTTCGATTGGGTGCATGAGGGCAAGCTCACAGTTAACCTTCCTTGGATTGAAGAAGCTGGTGGCGTTTCTGATttggcctttttctttta 2579 0.4494 MAPPNDPVIPSLKLLRSDPLEKIFDLCDGKLTVRGVPLLTRVPENVSLSPFSRACQNSDSSLPLLQLVLALSHRGAFLGFSQEQPSDRLINSLGRFSDRNFLSIFRFKTWWSTQWVGTCGSDLQMETQWILFDLPEIKSYAIIIPIIEGSFRSALHPGSDGHVLICAESGSSQVKSSNFDAIAYIHLSENPYNLMKEAYSSLRVHLNTFKLLEEKATPNLIDKFGWCTWDSFYLTVDPVGVWHGVKGFVEAGFSPRFIIIDDGWQSINLDDDDPNEDTKNLVLGGQQMTARLHRLDEGDKFKKYQGGLMLGPNALSFDPKKIKTLIGLGIKLERLEKERDEALQSGDPNLPQIEAKINKVKQEIDYLFGGEGNSNSKKECESSNSDNYGLKAFTRDLRSKFKGLDDIYVWHALCGAWGGVRPGTTHLNSKIVPCKLSPGLDGTMHDLAVVNIVKGSIGLVHPDQANDLYDSMHSHLAKSGVTGVKVDVIHCLEYVSEEYGGRVELAKAYYDGLSKSIEKNFNGTGIIASMQQCNDFFFLGSKQISMARVGDDFWFQDPNGDPMGVFWLQGLHVIHCSYNSLWMGQFIHPDWDMFQTDHVCAKFHAGSRAISGGPVYLSDSVGSHDFNLIKKLVYPDGTIPKCIYFPLPTRDCLFKNPLFDQKTVLKLWNLNKYGGVIGAFNCQGAGWDTKTHRFRGFPECYKPVTTSVHVSEIEWDQKVEAVEMGKAEEYVVYLNQAEDLHLISPKSPPFPITINPSSFELFSFVPVTKLKGTIKFAPIGLPNMFNSGGTIQELECSKIGAKLKVKGSGVFLAYANESPKKCQLNGAEVAFDWVHEGKLTVNLPWIEEAGGVSDLAFFF 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03110 859 Pfam Raffinose synthase or seed imbibition protein Sip1 25 842 IPR008811 -
Bva04g03110 859 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 4-RELATED 1 859 - -
Bva04g03110 859 SUPERFAMILY (Trans)glycosidases 221 632 IPR017853 -
Bva04g03110 859 Gene3D Aldolase class I 221 632 IPR013785 -
Bva04g03110 859 PANTHER - 1 859 IPR008811 -
Bva04g03110 859 Coils Coil 325 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03110 Bva-Chr4 25645279 25648767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03110 24 859 Glycoside Hydrolase AT4G01970 57.008 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03110 K06611 - gmx:100815922 1352.42