Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03101 ATGGAAGATTTAGGTGGTACCAGGTTTGGTGGCCTCAGCAATGCCGTAAGGAGGAAGAGGAGTCAAACCTCGCGCAGACCTCGGCCTGATTCACAGCCTGTTTCTGAAGGTCACGATCTGTCTCCATGGTCATCAACACCCCCTTCAGATGACACAGACAAAGGCTCTAGCGATGAGAATGGTGGTTGTGATATCAACTCCAAGCGAAAAGAATTAAACCTTAATCAATGTGTCTCCCAAGTGTCACATGCTAATGCAGCTGAAGACAAAAAATGCCATAAGAAGAGCAAAAAGGATGTAGGATTTCATGTATTTTACAATAATGAATCAGGGCAGGTTGGTTTGCATAAACGCAGTAGTGAGGGTGTCCTTGCACCTGCTAACTGGAAGTGCTCTAGCAAATTGGAGGTTGGGTCGGAATCAGAATCAAGAAGTGCAGAAGTGTATGGTGGAAGGAATTCTAAAGATCCGACTTTGGGACAGTCTGGATTTCCTGGAGATGGATTAGGAAACGAGAACAGGGTTAAGAAGGTCAAACTTAAGGTTTGTGGTGTGACACGTACTATTCAAGCCAACTCATCATCTAGTGGTGCATCTGGAAGTGGATCAACTGCAAAGAGCTCTCGATCCTCCGATTCTTCTAGGCCACGCCAAAAACAACAGGGCAATTCAGATGATAACTCCTCTCCTTCTGATAAAAGGAGTGGCCTGCAAGGTGTTCCATGGAAGGATTTCTCTAGGGGTGGTTTTGATCTTGTGAAGGAGGATTCCTCAATGGGGAAGATGCCTGGAAATAGCACATCTGCCAAGCGAGGAGACAATTCTGAACCAGTTCGCAAGAGCAAGCGAGTACCTAAAAGGCTTGTAGTTGATAGGGAATTTGGtggtgatgatgatgacgACGACGAGATACGGTACTTGGAAAAGCTCAAAACTTCAAAAGTTTCTACTATGTATAGAAATGATGAAGAATTAATCAAGAAACATCAAAAACTTTCTAGTGTGTCTAACATGGAAAGTTCTGGTTCATCAAGATCAGGCAAAGATGGTAAGAACAAATCCAGATCTGATAAGATGTTTGAGGATACTGAATacgaagaggaagaggaatcAGGATCTGATGGTGAGCTCgaagataagaaaaagaaaaaacagaagaaggaATCTGTTGATGTATTGATGGATGGGAAGAGGGAAATCACTCTCACAACTCGTCAACGGGCCCTTCAATCGAGCAAAGATGCCTCTGCATCTGGTGCAAGTTTAATTGAGTTTCCAAATGGATTACCACCTGCCCCTCCCAGAAagcaaaaggaaaagcttACCGAAGTGGAGCAGCAACTAAAGAAAGCTGAGGCTGCTCAAAGGCGTAGAATGCAAGTTGAGAATGCTGCTAGGGAATCTGagGCTGAAGCTATCAGAAAAATACTTGGTCAAGATTCCAGCAGGAAGAAGCGTgaagtgaaaataaagaagcGCCAAGAAGAACTGGCACAGGAGAAGGCAGCCAATGCACGGATGCTTGCGTCAAACACAATCAGATATGTAATGGGTCCTGCTGGAACGGTTGTGACATTTCCTGAGGAGATGGGACTCCCGAGCATATTCAACTCTAAAACCTCCAGTTATCCCCCGCCGCGTGATAAGTGTGCGGGTCCATCTTGTACCAATCCATACAAGTATCGGGATTCCAAGTCAAAGCTTCCTCTTTGCAGTCTCCAATGCTACAAGGCAATCCAGGGGAAGATGGCGGTTGAAGCTGCCACTTA 1769 0.4274 MEDLGGTRFGGLSNAVRRKRSQTSRRPRPDSQPVSEGHDLSPWSSTPPSDDTDKGSSDENGGCDINSKRKELNLNQCVSQVSHANAAEDKKCHKKSKKDVGFHVFYNNESGQVGLHKRSSEGVLAPANWKCSSKLEVGSESESRSAEVYGGRNSKDPTLGQSGFPGDGLGNENRVKKVKLKVCGVTRTIQANSSSSGASGSGSTAKSSRSSDSSRPRQKQQGNSDDNSSPSDKRSGLQGVPWKDFSRGGFDLVKEDSSMGKMPGNSTSAKRGDNSEPVRKSKRVPKRLVVDREFGGDDDDDDEIRYLEKLKTSKVSTMYRNDEELIKKHQKLSSVSNMESSGSSRSGKDGKNKSRSDKMFEDTEYEEEEESGSDGELEDKKKKKQKKESVDVLMDGKREITLTTRQRALQSSKDASASGASLIEFPNGLPPAPPRKQKEKLTEVEQQLKKAEAAQRRRMQVENAARESEAEAIRKILGQDSSRKKREVKIKKRQEELAQEKAANARMLASNTIRYVMGPAGTVVTFPEEMGLPSIFNSKTSSYPPPRDKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAIQGKMAVEAAT 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03101 589 MobiDBLite consensus disorder prediction 132 175 - -
Bva04g03101 589 SMART PAPA_1_2 445 530 IPR006880 GO:0031011
Bva04g03101 589 MobiDBLite consensus disorder prediction 37 51 - -
Bva04g03101 589 MobiDBLite consensus disorder prediction 273 294 - -
Bva04g03101 589 MobiDBLite consensus disorder prediction 1 69 - -
Bva04g03101 589 Pfam HIT zinc finger 546 577 IPR007529 -
Bva04g03101 589 Pfam PAPA-1-like conserved region 445 530 IPR006880 GO:0031011
Bva04g03101 589 MobiDBLite consensus disorder prediction 403 418 - -
Bva04g03101 589 MobiDBLite consensus disorder prediction 331 345 - -
Bva04g03101 589 MobiDBLite consensus disorder prediction 375 402 - -
Bva04g03101 589 MobiDBLite consensus disorder prediction 52 66 - -
Bva04g03101 589 MobiDBLite consensus disorder prediction 452 487 - -
Bva04g03101 589 MobiDBLite consensus disorder prediction 187 235 - -
Bva04g03101 589 Coils Coil 444 471 - -
Bva04g03101 589 PANTHER INO80 COMPLEX SUBUNIT B 1 585 IPR029523 GO:0006338|GO:0031011
Bva04g03101 589 MobiDBLite consensus disorder prediction 187 439 - -
Bva04g03101 589 MobiDBLite consensus disorder prediction 304 330 - -
Bva04g03101 589 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 585 - -
Bva04g03101 589 MobiDBLite consensus disorder prediction 346 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03101 Bva-Chr4 25588929 25593033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03101 - - gmx:100814323 793.882