Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03082 ATGGCGGTTACTGCACCCTGTCCAAATGCTACAGAGAAGAAGCACTGGTGGCTTACCAACCGAAGGTTGGTTGAAAAATACATCAAAGACGCTCGCAGCCTTATCGCGACCCAAGAACAGAGCGAGATCGCTTCCGCTCTTAATCTTCTAGACGCGGCTCTGGCAATCTCCCCGCGCTTAGAGCAAGCCCTTGAGCTCAAAGCCAGGTCTCTGCTCTATCTCCGGCGGTTCAAGGAGGTTGCTGATATGCTTCAAGACTACATTCCGAGTTTGAAAATGGCAAACGAAGATTCGGGTTCCTTTTCTTCTGATAACTTTTCTCTGCAGCATTCGAGGGAGGGAGTCAAGCTTCTCTCTTCCTCTGAATCCCACAGCCGGGATCAGAGTTTCAAGTGCTTCTCTGTCTCCGACTTGAAGAAGAAGGTGATGGCGGGACTCTGTAAAAGTGGCGAGAAGGAAGGGCAATGGAGGTACTTGGTTCTGGGACAAGCATGCTTCCATCTTGGCCTAATGGAGGATGCGATGGTTCTTCTCCAAACGGACATCCCTTTCTCCGGCGACATCAACCCCACCAACCCACCGCCCCCTTCTCCACCGCGAACACCACTCACTGAGTCTGAGAGTGTTACCCAGTTGATGAGCTACATAAAGCTACTCATCCGCCGTCGTACCGCAGCAGTAGCAGCTCTTGAAGCCGGCCTCCATTCCGAAGCCATTCGCCATTTCTCCAAAATCGTCGATGGCCGTCGTGGTGCTCCGCAAGGTTTTCTAGCAGAATGCTACATGCATAGAGCCTCTGCCTACCGTTCTGCTGGTCGAATTGCTGAGTCGATTGCTGATTGTAATCGGACTCTGGCTCTTAACCATTCATGCATTCAAGCTCTTGAAACCAGGGCTTCCCTTCTGGAAACCATTCGTTGCTTACCAGATTGTTTACACGATCTTGAACACTTGAAACTTTTGTATAATTCTATCTTGAGGGATCGCAAGCTTCCGGGTCCTGCTTGGAAGCGTCACAATGTGAGGTACATAGAGATTCCCGGGAAACTTTGCGCTCTCACTACCAAAATTCAAGAATTGAAGAGCAGGGTGGCTGCTGGGGAGACCGGGAATGTAGATTACTATGCTCTTATCGGATTGCGACGTGGGTGTTCCCGATCAGAGTTGGAGAGAGCTCATCGATTGCTCTGTTTGCGCCACAAGCCTGATAAAGCTATCACCTTTATTGACCGCTGTGAGCTTGCGGATGAACGCGATCTTGAATCGGTTAAGGACAGAGCAAAAATGTCAGCTTTGTTGCTGTATAGATTGCTTCAAAAGGGTTACACGAGTATAATGTCTAATATAATGGACGAAGAAGCTGCTGAAAAACAGAGGAAGAAGGCCGCAGCTGCATTGCAAGCAGCAATACAAGTCCAGCAAGCGAACGAGTCTAGAACTGAATCTGATTTGAATAAAGCAGAGATTATGGGTTCTGAAAGGACAGCTTCTTCTATTTGCAATGCGTCAGTTTTCCAGGGCGTGTTTTGCCGTGATCTTGCTGCAGTTGGTAACTTGCTTTCACAAGCGGGATTCAATCGTCCAATTCCGGTGAAATATGAGGCATTGAGCTGCTG 1616 0.4895 MAVTAPCPNATEKKHWWLTNRRLVEKYIKDARSLIATQEQSEIASALNLLDAALAISPRLEQALELKARSLLYLRRFKEVADMLQDYIPSLKMANEDSGSFSSDNFSLQHSREGVKLLSSSESHSRDQSFKCFSVSDLKKKVMAGLCKSGEKEGQWRYLVLGQACFHLGLMEDAMVLLQTDIPFSGDINPTNPPPPSPPRTPLTESESVTQLMSYIKLLIRRRTAAVAALEAGLHSEAIRHFSKIVDGRRGAPQGFLAECYMHRASAYRSAGRIAESIADCNRTLALNHSCIQALETRASLLETIRCLPDCLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYIEIPGKLCALTTKIQELKSRVAAGETGNVDYYALIGLRRGCSRSELERAHRLLCLRHKPDKAITFIDRCELADERDLESVKDRAKMSALLLYRLLQKGYTSIMSNIMDEEAAEKQRKKAAAALQAAIQVQQANESRTESDLNKAEIMGSERTASSICNASVFQGVFCRDLAAVGNLLSQAGFNRPIPVKYEALSC 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03082 538 SUPERFAMILY TPR-like 225 472 IPR011990 GO:0005515
Bva04g03082 538 SUPERFAMILY Chaperone J-domain 369 407 IPR036869 -
Bva04g03082 538 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 538 - -
Bva04g03082 538 Gene3D Tetratricopeptide repeat domain 20 324 IPR011990 GO:0005515
Bva04g03082 538 CDD DnaJ 373 405 IPR001623 -
Bva04g03082 538 Gene3D DnaJ domain 359 503 IPR036869 -
Bva04g03082 538 PANTHER - 1 538 - -
Bva04g03082 538 SMART tpr_5 258 291 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03082 Bva-Chr4 25481330 25484134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03082 - - pvy:116146785 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03082 04 25481330 25484134 Bva13g03044 13 21607376 21610238 BWGD