Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03077 ATGGCGCATCTAAGAGCGAAATTGTTCTTCCTTTTGTGTGTCTTGTGTTATTCTCTCAACGCCATTGCGGGGAAGAGCTACTATGATATACTTCAAGTGCCCAAGGGTGCGTCGGACGAGCAGATAAAGAGGGCCTATAGGAAGCTGGCCTTGAAGTACCATCCCGATAAGAATCAGGGCAATGAAGAAGCTAACAAGAGATTTGCTGAGATCAACAATGCATATGAAGTGTTGTCGGATGGTgagaaaaggaatatatatgaTAGATACGGTGAAGAGGGTTTGAAACAGCATGCTGCTAGTGGAGGCAGAGGTGGTGGAATGAACTTCCAAGACATATTCAGCACtttCTTTGGGGGAGGTTCAATggaggaggaagagaaaattgtaAAAGGTGATGACGTGGTTGTTGAATTGGATGCAACTCTGGAAGATTTGTACATGGGAGGTTCCTTGAAGGTTTGGAGGGAGAAGAATGTTGTAAAGCCAGCACCCGGGAAGAGGCGCTGTAACTGCAGAAATGAGGTTTATCACAAGCAAATTGGTCCTGGGATGTTTCAACAGATGACAGAGCAGGTCTGTGAACAATGTCCTAATGTCAAATATGAAAGGGAGGGGTATTTCATCACCGTTGATATTGAGAAAGGCATGCGGGATGGGCAGGAGGTCCTATTTTATGAAGATGGTGAGCCCATAATTGATGGAGAATCTGGAGATTTAAGGTTTCGCATTCGCACAGCACCCCATGATGTCTTCAGAAGGGATAGCAATGACTTGCACACGACTGTCACCATAACTCTGGTTCAAGCTCTTGTTGGTTTTGAGAAGACCATTAAACACCTGGATGATCATCTTGTAGATATCAGCTCAAAGGCAATTACAAAGCCAAAGGAAGTGAGGAAATTCAAAGGGGAGGGCATGCCATTGCATGTGAGCAATAAGAAAGGAGATCTTTACGTAACTTTTGAGGTTCTATTCCCCACGTCACTTACGGAAGAGCAGAAAACAAAGATCAAAGAAATTCTTGGTTA 1031 0.4258 MAHLRAKLFFLLCVLCYSLNAIAGKSYYDILQVPKGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDGEKRNIYDRYGEEGLKQHAASGGRGGGMNFQDIFSTFFGGGSMEEEEKIVKGDDVVVELDATLEDLYMGGSLKVWREKNVVKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCEQCPNVKYEREGYFITVDIEKGMRDGQEVLFYEDGEPIIDGESGDLRFRIRTAPHDVFRRDSNDLHTTVTITLVQALVGFEKTIKHLDDHLVDISSKAITKPKEVRKFKGEGMPLHVSNKKGDLYVTFEVLFPTSLTEEQKTKIKEILG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03077 343 CDD DnaJ_C 133 330 - -
Bva04g03077 343 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Bva04g03077 343 CDD DnaJ 27 80 IPR001623 -
Bva04g03077 343 SMART dnaj_3 25 83 IPR001623 -
Bva04g03077 343 Pfam DnaJ C terminal domain 136 327 IPR002939 -
Bva04g03077 343 PRINTS DnaJ domain signature 28 46 IPR001623 -
Bva04g03077 343 PRINTS DnaJ domain signature 46 61 IPR001623 -
Bva04g03077 343 PRINTS DnaJ domain signature 63 83 IPR001623 -
Bva04g03077 343 PRINTS DnaJ domain signature 83 102 IPR001623 -
Bva04g03077 343 Gene3D - 248 342 - -
Bva04g03077 343 Gene3D - 127 247 - -
Bva04g03077 343 PANTHER BNAA09G39960D PROTEIN 8 342 - -
Bva04g03077 343 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Bva04g03077 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 251 336 IPR008971 GO:0006457|GO:0051082
Bva04g03077 343 Gene3D DnaJ domain 23 126 IPR036869 -
Bva04g03077 343 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 8 342 IPR044713 GO:0006457|GO:0030544
Bva04g03077 343 Pfam DnaJ domain 27 88 IPR001623 -
Bva04g03077 343 SUPERFAMILY Chaperone J-domain 23 122 IPR036869 -
Bva04g03077 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 130 259 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03077 Bva-Chr4 25458935 25462178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03077 42 88 Miscellaneous Gene Families AT5G49580 55.319 5.36e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03077 K09517 - pvy:116132441 643.654