Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03062 ATGGTGAAAACGGCTTCGTCTCCTTCTTCCTCTCCGGTGACCATAACAGTGTCATCTGGAGGAAAAGGAGGAGGAAGTAGAAGCATGGGGCTGACGAGTCCTGTTCCACGTGCTTCATTGTCAAACAACCCCAATTCCCCTCTCAGTGGCAGAGCAAACAGACGTTCCAGTGGTGGAAGGCGAACATCGATCGGTGGTAGTGTTAGCTCCATGTCAAAAGAGGGTACTGTAGATCAAACCAATTCAGAATACGTAACATACACTGTTCATATACCTCCTACCCCTGATCGTCAGACCATATCAGATTCACAGACAAGCCTCCCTGAAGAAGGCAAGAATGTGGAAAAGCCTGAAACAAGTTACATTTCAGGTACCATTTTCACTGGTGGGTTTAATTCTGTAACCCGAGCCCATGTCATTGAGTCCTCCATGGATCACAAGGAGCCAATGAAATCTGGATTGGTTTGTGGAATGAAAGGTTGTGACGAGGAAGCATTTCAAACCAATTCGGATAGTCCATGCGAGTGTGGGTTCAAGATTTGCAGGGATTGTTATCTGGAGTGTGTTGGAAATGGAGGTGGTCGTTGTCCTGGCTGCAAAGAACCTTACAAGTATGtaagtgatgatgaagatgatgaccAGATATCTGAGGCAGAAGACCAGGCCCTGCCATTACCTTCAATGGCAGAATTCAAATTGGATAACAGGTTTTCCCTCGTGAAATCATTTAAAGCACAGAACCACCCACCAGAATTCGATCACACTCGTTGGCTCTTCGACACAAAGGGGACTTACGGGTATGGAAATGCAGTTTGGCCTAAAGATGGATATGGCGCCGGTTCAGGTGCTAATGGATTTGAGGCCCCTCCAGATTTCGGAGAGAAAACTAGGAGACCTTTAACAAGAAAGGTTGGGATTTCAGCTGCAATTCTTAGCCCATACAGATTACTTATTATGATACGTCTTGCTGCACTGGGATTGTTTCTTACATGGAGGATTCGACACCCAAACCATGAGGCAATTTGGTTGTGGGGATTGTCTGTAACTTGTGAACTCTGGTTTGCATTCTCTTGGCTTCTAGATCAGCTTCCCAAGCTCTGCCCTGTGAATAGAGTCACTGATCTCTCTGTTCTAAAAGACCGGTTTGAATCCCCAAACCTTCGCAACCCAAAAGGAAGATCTGATCTACTTGGTATTGACGTTTTTGTTTCCACAGCAGACCCAGAAAAAGAGCCTCCACTTGTCACCTGTAATACCATTCTTTCGATCCTTGCTGTTGATTATCCAGTAGAAAAGCTAGCTTGTTACTTATCTGATGATGGTGGTTCTCTGTTAACATTCGAAGCTCTGGCTGAGACAGCTAGCTTTGCAAGAATATGGGTTCCTTTTTGCCGAAAGCACCAAATAGAACCAAGGAATCCTGAAGCATATTTTGGGCAGAAGCGTGATTTCCTCAAGAACAAAGTACGGCTTGATTTTGTAAGGGAGAGGAGAAGGGTGAAGAGAGAATATGATGAATTTAAAGTGAGGATAAATTCTCTTCCTGAATCGATTAGGAGAAGATCTGATGCTTACAATGCTCATGAGGAGCTACGagctaaaaagaaacaaatggaAATGGGTTCCAATGTCTCTGAAGTCATTAAGGTCCCTAAGGCAACGTGGATGTCAGATGGTTCTCATTGGCCAGGAACATGGTCATCGGCAGAGGCAGAACACTCAAGAGGGGATCATGCTGGTATTATTCAGGCAATGTTAGCTCCATCAAATGCAGAACCAGAATATGGTGCAGAAGCTGATGGCGAACGCTTGATTGACACAACGGATGTTGATATTAGGCTGCCCATGCTGGTTTATGTGTCTCGCGAGAAGAGGCCAGGTTATGATCACAATAAGAAAGCTGGAGCTATGAATGCTCTAGTGCGAACTAGTGCCATCATGTCAAATGGACCATTTATTCTGAACCTTGACTGTGATCATTACGTTTACAACTCATTGGCTCTCAGGGAAGGTATGTGCTTTATGCTTGACCGGGGTGGTGATAGGATATGTTACGTTCAATTCCCACAAAGGTTTGAGGGTATTGACCCCAGTGATCGATATGCAAACCATAATACAGTGTTCTTTGATGTAAACATGAGAGCCCTTGATGGCTTACAGGGTCCCATGTATGTGGGCACGGGCTGTATTTTTAGAAGAACTGCCATTTATGGGTTTAGCCCTCCTAGAGCTACCGAGCATCGTGGATGGCTTGGTaggaggaaaataaaattgtttttgagaaAACCCAAGGTgtgcaaaaaagaagaagatgaaatagCTCTTCCAATCAATGACCCCAACGATGATGATGCAGATGTTGAGTCTTTGCTTCTTCCCGAAAGGTTTGGGAACTCTACTTCTCTAGTTGCATCCATCCCTGTAGCAGAATATCAAGGAAGGTTGCTTCAAGGAACTCAAGGAAGGCCAGCAGGTTCTCTTGCAGTTCCTCGTGAGCCATTGGATGCTGCTACTGTCGCGGAGGCAATAAGTGTCATATCTTGCTTCTATGAGGATAAAACTGAGTGGGGCAAAAGAGTTGGATGGATATATGGTTCTGTTACCGAAGATGTGGTGACTGGTTATAGAATGCACAACAGAGGGTGGAGGTCTGTGTACTGTGTGACAAAAAGGGATGCTTTTCGTGGAACAGCTCCAATCAATTTAACAGACAGGCTCCACCAAGTGCTTCGGTGGGCAACAGGATCTGTTGAGATCTTCTTCTCAAGGAATAATGCACTATTTGCTAGTCCTAGAATGAAGTTCTTACAGAGGGTGGCATACTTTAATGTAGGAATGTACCCTTTCACTTCCATGTTTCTGCTAGTCTATTGCTTTCTGCCTGCCGTTTCTCTATTCTCTGGACAGTTTATAGTTCAATCCTTAAGTGTAACCTTCCTGGTATTCTTGTTGGCCATCACTTTAACGCTGTGTTTGCTTTCACTTCTTGAGATCAAATGGTCAGGGATTACTCTACACGATTGGTGGCGAAATGAACAATTCTGGTTAATTGGTGGAACAAGTGCCCATCCTGCTGCTGTTCTACAAGGATTTTTGAAGGTCATAGCTGGAGTAGACATATCATTTACACTAACATCGAAGTCTGCTACCCCAGAAGATGGTGACGATGAATTTGCAGACCTTTATGTGGTAAAGTGGAGCTTTCTAATGATCCCTCCCATCACAATTATGATGGTGAACACGATTGCAATTGCTGTAGGAGTAGCCAGGACAATGTACAGCCCATTTCCACAGTGGAGCAAACTAGTAGGGGGCGTATTCTTCAGTTTCTGGGTTTTATGCCATCTTTACCCGTTTGCAAAGGGGCTCATGGGTAGGAGAGGGAGGGTTCCAACCATTGTCTACGTCTGGTCTGGGTTGCTCTCAATCATTATTTCATTGCTCTGGGTGTATATAAACCCCCCCTCTGGAACACAGGATTACATGAAGTTCCAGTTCCCTTA 3503 0.4371 MVKTASSPSSSPVTITVSSGGKGGGSRSMGLTSPVPRASLSNNPNSPLSGRANRRSSGGRRTSIGGSVSSMSKEGTVDQTNSEYVTYTVHIPPTPDRQTISDSQTSLPEEGKNVEKPETSYISGTIFTGGFNSVTRAHVIESSMDHKEPMKSGLVCGMKGCDEEAFQTNSDSPCECGFKICRDCYLECVGNGGGRCPGCKEPYKYVSDDEDDDQISEAEDQALPLPSMAEFKLDNRFSLVKSFKAQNHPPEFDHTRWLFDTKGTYGYGNAVWPKDGYGAGSGANGFEAPPDFGEKTRRPLTRKVGISAAILSPYRLLIMIRLAALGLFLTWRIRHPNHEAIWLWGLSVTCELWFAFSWLLDQLPKLCPVNRVTDLSVLKDRFESPNLRNPKGRSDLLGIDVFVSTADPEKEPPLVTCNTILSILAVDYPVEKLACYLSDDGGSLLTFEALAETASFARIWVPFCRKHQIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMEMGSNVSEVIKVPKATWMSDGSHWPGTWSSAEAEHSRGDHAGIIQAMLAPSNAEPEYGAEADGERLIDTTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYVYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPMYVGTGCIFRRTAIYGFSPPRATEHRGWLGRRKIKLFLRKPKVCKKEEDEIALPINDPNDDDADVESLLLPERFGNSTSLVASIPVAEYQGRLLQGTQGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASPRMKFLQRVAYFNVGMYPFTSMFLLVYCFLPAVSLFSGQFIVQSLSVTFLVFLLAITLTLCLLSLLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGFLKVIAGVDISFTLTSKSATPEDGDDEFADLYVVKWSFLMIPPITIMMVNTIAIAVGVARTMYSPFPQWSKLVGGVFFSFWVLCHLYPFAKGLMGRRGRVPTIVYVWSGLLSIIISLLWVYINPPSGTQDYMKFQFP 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03062 1167 MobiDBLite consensus disorder prediction 1 78 - -
Bva04g03062 1167 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 599 747 IPR029044 -
Bva04g03062 1167 MobiDBLite consensus disorder prediction 90 116 - -
Bva04g03062 1167 Pfam RING/Ubox like zinc-binding domain 159 204 - -
Bva04g03062 1167 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 100 1160 - -
Bva04g03062 1167 Pfam Cellulose synthase 399 1165 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva04g03062 1167 SUPERFAMILY RING/U-box 152 205 - -
Bva04g03062 1167 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 100 1160 - -
Bva04g03062 1167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 222 IPR013083 -
Bva04g03062 1167 SUPERFAMILY Nucleotide-diphospho-sugar transferases 414 961 IPR029044 -
Bva04g03062 1167 MobiDBLite consensus disorder prediction 90 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03062 Bva-Chr4 25399619 25404080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03062 37 1167 Glycosyltransferase AT3G03050 65.974 0.0 1533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03062 K00770 - tcc:18613638 2035.77