Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03033 ATGCACTCTTCCAAAACCCGCCGGAAAGTTTTTCCGGCGAACGGTGAAGACTCTTCTGACAAACAAGACCAGCTCCTTCTGTCCTCGGCTATCTGCAACAACGAGGACTTGGGGCCCTTTGTCCGTAAGGCTTTTGTCTCCAGCAAGCCTGAGACACTTCTCCATCTCCTCCGTCATTTTGCTCGCTCCAAAGAATCCGAGATCGAAGAGGTTTGCAAGGCACACTACCAGGACTTCATCCTTGCCGTTGATGACCTTCGTTCCCTCCTATCAGACGTCGATTCCCTCAAGTCATCTTTATCTGATTCGAACTCCAAGCTGCAGTTTGTTGCTCGCCCGCTACTCTCTTCTCTCGACGCCTTCGCTGAAACCCAAAACATCTCTAAGAACGTTAACCTTGCTCTAGAAGCGGTCCGAACTTGTTTTCAGTTGACGGAAGTTTGCTCGAGAGCGAATCATCATCTGTCCAGTGATAATTTCTACATGGCTTTGAAGTGCGTCGATACGATTGAGAGGGAGCTTTTGGATAAAACGCCGTCGTCGACACTAAAGAAGATGCTGGAGAAGAAGATCCCGGAGATTCGGTCGCATATAGAGAGGAAGGTGAGCAAGGAGTTCGGAGACTGGCTGGTGGAGATCCGAGTGGTGAGTCGTAATTTGGGTCAATTGGCAATCGGTCAGGCCTCATCAGCGAGGCAAAGAGAAGAGGATCTCAGAATTAAGCAGCGGCAAGCGGAGGAACAAAGCCGACTTAGTTTTAGAGACTGCGTTTATGCtttggaggaagaagatgaggaTGGGCTTTCTGCTGGCGGCGACATTGGAGAGGATGGTAAGGATACGTTTGGTAATGGTGGAGGAGGAGGTGGAATTTTAGGATTTGATTTGACGCCGTTATACAGGGCTTACCATATCAACCAAACATTAGGACTAGAAGACCGGTTTAAGCAGTATTATTTTGAGAACAGAAAGCTTCAGTTGACATCGGACTTTCAGGTATCGTCAATGACACCTTTTCTTGAGTCCCATCAGACTTTTTTTGCACAAATTGCGGGTTTCTTTATAGTCGAGGATAGGGTCTTAAGGACTGGCGGTGGTCTGATATCAAAAATGGAAGTTGAGAATTTGTGGGAAACTGCTGTTAGCAAAATGTGTTCTGTGTTAGAGGATCAGTTCTCCAGAATGCAAACTGCTAATCATCTCTTGCTGATTAAAGATTATGTGAGTCTATTAGGAGTAACTCTGCGAAGATATGGGTACGCTATTGACGCATTGCTTGATGTTTTGAGCAAACATAGGGATAAATACCATGAATTGCTCTTGTCCGACTGTCGTAAACAGATTTCGGAGGCGCTTGCTGCTGATAAGTTTGAGCAGATGCTGATGAAGAAAGAGTACGAATATTCTATGAATGtgctttcttttcaactaCAAACATCGGATATTATACCTGCTTTTCCTTATGTAGCTCCGTTCTCATCGACAGTACCAGATTGTTGCCGCATTGTGCGGTCTTTTATCGAGGATTCTGTCAGTTTCATGTCATCTGGTGGGCAACTAGAGTTCTACGAAgttattaagaaatatttggaCAGACTTCTGAGTGAGGATTTGGATGGAGCTTTATTGAAGCTTATTAGTACATCAGTACATGGTGTCTCCCAGGCAATGCAGGTAGCAGCAAATATGGCTGTCTTGGAGCGTGCatgtgattttttctttcGCCATGCTGCGCAGCTCTCAGGGGTTCCCTTGAGAATGGTAGAGAGAAGCAGGAGACAGTTTCCTCTGAGTAAATCTCGTGATGCAGCAGAAGAGATGCTCTCTGGGTTGCTCAAAACCAAGGTTGATGGATTCATGACCTTGATTGAGAATGTGAATTGGATGGCTGATGATGCACCTCAGAGTGGGAATGAATATGTAAATGagttgataatttatttgaaaactcTGGTTTCAACTTCTCAGCAGATATTGCCGGCTAATGTCCTTAAAAGAGTTCTTCAGGAAGTTCTTACTCACATATCGGAGAAAATAGTTGGGGCTTTACTAAGCGATTCTGTTAAGAGGTTTAATGTGAATGCTATTACGGGGATTGATGTGGATATTCGAATTTTGGAATCATTTACTGGAAATCAGGGTCCCCTTTTCTCAGATGAGGATGTAGATCAGTTGAAAACAGCGCTTGTTGAGTCAAGGcatttgattaatttgctATTAAGCAATCATCCAGAGAACTTCCTGAATCCAGTGATCAGGGACAGGAGTTACAATACTTTGGACCACAAGAAAATAGTTACTATTTCAGAAAAGTTGAGGGATCCTTCGGATCGGCTTTTTGGAACTTTTGGTAGTCGTGGAACCAGGCAGAATCCTAAAAAGAAATCACTTGATGCATTAATAAAAAGACTTAAGGATGTTAGCTG 2426 0.4262 MHSSKTRRKVFPANGEDSSDKQDQLLLSSAICNNEDLGPFVRKAFVSSKPETLLHLLRHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSSLSDSNSKLQFVARPLLSSLDAFAETQNISKNVNLALEAVRTCFQLTEVCSRANHHLSSDNFYMALKCVDTIERELLDKTPSSTLKKMLEKKIPEIRSHIERKVSKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSFRDCVYALEEEDEDGLSAGGDIGEDGKDTFGNGGGGGGILGFDLTPLYRAYHINQTLGLEDRFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFIVEDRVLRTGGGLISKMEVENLWETAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYAIDALLDVLSKHRDKYHELLLSDCRKQISEALAADKFEQMLMKKEYEYSMNVLSFQLQTSDIIPAFPYVAPFSSTVPDCCRIVRSFIEDSVSFMSSGGQLEFYEVIKKYLDRLLSEDLDGALLKLISTSVHGVSQAMQVAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRQFPLSKSRDAAEEMLSGLLKTKVDGFMTLIENVNWMADDAPQSGNEYVNELIIYLKTLVSTSQQILPANVLKRVLQEVLTHISEKIVGALLSDSVKRFNVNAITGIDVDIRILESFTGNQGPLFSDEDVDQLKTALVESRHLINLLLSNHPENFLNPVIRDRSYNTLDHKKIVTISEKLRDPSDRLFGTFGSRGTRQNPKKKSLDALIKRLKDVS 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03033 808 Coils Coil 228 248 - -
Bva04g03033 808 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 600 747 IPR042044 -
Bva04g03033 808 Gene3D - 422 594 IPR042045 -
Bva04g03033 808 PIRSF Sec15 1 808 IPR007225 GO:0006886|GO:0090522
Bva04g03033 808 MobiDBLite consensus disorder prediction 1 21 - -
Bva04g03033 808 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 5 808 - -
Bva04g03033 808 Pfam Exocyst complex subunit Sec15-like 468 772 IPR046361 -
Bva04g03033 808 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 638 751 IPR014772 -
Bva04g03033 808 PANTHER SEC15 5 808 IPR007225 GO:0006886|GO:0090522
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03033 Bva-Chr4 25284815 25287525 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03033 K19985 - mnt:21394381 1319.29