Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03021 ATGGCTTCCGAATTGATTTACAGAGGGCACGAGAGCCAACCTTTGTCGGACGAATATTCCCCCAAGCCACACAAGCCATGGCTTTCCGTGACTCGGCCGATTCGGTACTTGCTCCTGGAACAACGACTCATTTTCGTCTTGGTCGGCATTGCCATAGCGACCATATTTTTCACCGTGGTGCCTTCTTCGCGTACGTCCTACACACGGGAATATGACCCGGTCCCGATCCCTTACTTCGAACACGAGTCGACTCAGTGGAGCCATAGGCCCAAGTATGACTACAGGTTGGCGGTGCATTCGGGTGGGAAGGTTCCTCTCGGGATCAAACGTAAGGGGCTCCGGATCGTTGTTACGGGTGGAGCTGGTTTCGTCGGGTCCCACCTCGTGGATCGCCTCATAGCTAGAGGAGACAGCGTCATCGTCGTCGATAATTTTTTCACCGGAAGGAAAGAGAACGTGATGCACCACTTCGGCAACCCCAGATTTGATCTCATCCGCCATGACGTCGTTGAACCTCTCTTGCTTGAGGTCGATCAGATCTACCATCTTGCTTGCCCTGCTTCCCCTGTTCACTACAAGTTCAACCCAGTCAAGACTATTAAGACCAATGTGGTGGGGACTTTGAACATGCTGGGACTGGCGAAAAGAGTGGGCGCAAGGTTCTTGCTAACTAGCACCAGTGAGGTTTATGGCGATCCTCTGCAGCACCCTCAGAAGGAGACCTACTGGGGCAATGTTAATCCCATCGGTGGGTACCATTTCTTTCTACCTCTCTCTCATCTTGTTGTCATAGTTTCCGGTGACCGGAATTTGGCTACATTACATTCTCTTCTTTCGGGAAGCCAACGACGCATTTCTGGTGTCCGAAGTTGCTACGATGAGGGAAAGCGTACCGCCGAGACATTGACCATGGATTACCACAGAGGAGCAGGAGTCGAGGTTAGAATTGCTAGAATCTTTAATACGTACGGCCCCCGAATGTGCTTGGATGACGGTCGTGTCGTTAGCAACTTCGTTGCtcagGCACTGAGAAAGGAGCCTTTGACGGTTTATGGTGATGGGAAGCAGACAAGGAGTTTCCAATATGTTTCTGATTTGGTGGAGGGTCTGATTCGCCTTATGGAGGGAGAACATGTGGGACCTTTCAATCTTGGAAATCCGGGTGAATTCACAATGCTTGAACTCGCCAAGGTGGTCCAAGAGACGATTGACCCGGATGCAAAGATAGAGTACAGGCCGAACACAGAGGATGACCCACATAAGAGGAAGCCTGACATTTCACGGGCTAAGGAGCTGCTTGGCTGGGAACCAAAGGTGGACCTCCACAAGGGTCTCCCTCTAATGGTTTCTGACTTCAGACAACGCATATTCGGTGATCACAAGGAAGCTTCATCTTA 1397 0.5089 MASELIYRGHESQPLSDEYSPKPHKPWLSVTRPIRYLLLEQRLIFVLVGIAIATIFFTVVPSSRTSYTREYDPVPIPYFEHESTQWSHRPKYDYRLAVHSGGKVPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFDLIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGGYHFFLPLSHLVVIVSGDRNLATLHSLLSGSQRRISGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLIRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPDAKIEYRPNTEDDPHKRKPDISRAKELLGWEPKVDLHKGLPLMVSDFRQRIFGDHKEASS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03021 465 CDD UGD_SDR_e 114 453 - -
Bva04g03021 465 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 287 463 IPR044516 GO:0042732|GO:0048040|GO:0070403
Bva04g03021 465 Gene3D - 271 457 - -
Bva04g03021 465 Gene3D - 109 238 - -
Bva04g03021 465 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE 4 287 463 - -
Bva04g03021 465 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 114 455 IPR036291 -
Bva04g03021 465 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE 4 1 250 - -
Bva04g03021 465 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 250 IPR044516 GO:0042732|GO:0048040|GO:0070403
Bva04g03021 465 MobiDBLite consensus disorder prediction 1 23 - -
Bva04g03021 465 Pfam GDP-mannose 4,6 dehydratase 117 241 IPR016040 -
Bva04g03021 465 Pfam GDP-mannose 4,6 dehydratase 289 446 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03021 Bva-Chr4 25226818 25231088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03021 20 464 Miscellaneous Gene Families AT4G00110 22.661 1.71e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03021 K08678 - gmx:100783463 753.821