Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03017 ATGGCATCAGGCTGGGGAATTAATGGCAACAAAGGTCGTTGCTACGATTTCTGGATCGACTTTAGTGAGTGCATGTCTCGATGCCGAGAGCCCAAGGACTGCGCTCTCCTCCGCGAAGACTACCTTGAATGTCTCCACCATTCCAAAGAGTTTCAACGAAGGAATCGGATTTATAAGGAGGAGCAGCGTAAACTAAGAGCTGCTGCACGGAAGGAACAGGAAGATGGGGCTGTTCATGGACATCATTA 248 0.4919 MASGWGINGNKGRCYDFWIDFSECMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAARKEQEDGAVHGHH 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03017 82 Coils Coil 55 75 - -
Bva04g03017 82 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 11 52 - -
Bva04g03017 82 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 5 1 82 IPR019342 -
Bva04g03017 82 MobiDBLite consensus disorder prediction 63 82 - -
Bva04g03017 82 Pfam NADH:ubiquinone oxidoreductase, NDUFS5-15kDa 12 65 IPR019342 -
Bva04g03017 82 PANTHER BNAC04G00180D PROTEIN 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03017 Bva-Chr4 25213403 25215338 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03017 K03938 - gmx:100306303 165.236