Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03010 ATGGAAACCAATATGGCTATCGATGTAGAAGACGAAGGGTCGTCCCCGAACCCCAACTCTCATAAACGGTTCGGACTCAAGAACTCTATCCAAACCAACTTTGGCGACGACTACGTTTTCCAAATCGTCCCAAAGAGTGATTGGAGTACAATGGCCGTATCCTTGTCGACGAACACAGTAAAGTTGTATTCACCGGAAGCGGGTCAGTATTGTGGAGAGTGCAGGGGTCATTCTTCAACCAtcaatcaaattttgttttctgttcCTTCGGACCCTCATGTTTTAAGCTCTTGCTCTTCTGACGGAACTATTAAAGCTTGGGACACCCGAACATTCCAGCAGGTGTCTTGCATAACTGCTGGTTCTTCTCAAGAGGTCTTTAGCTTCTCTTTTGGAGGGGTCAGTGGGAATTTAATTGCTGCCGGCTGTAAGTCTCAGATACTGTTCTGGGATTGGAGAAACAAGAAGCAAATTGCATGCTTGGAGGAGTCTCATGTTGAAGATGTTACTCAGGTTCATTTTGTCCCTGACCAACAAGACAAGCTTGTTTCTGCTTCCGTTGATGGTCTGATATGCACATTTGATACCAATGGAGACATCAATGATGACGATCATCTGGAATCAGTGATTAATGTGGAGACCTCGATTGCAAAGGTGGGGTTTTTTGGAGAAGGTTATCGGAAGCTTTGGTGTTTAACTCATATTGAAACCTTGGGTATTTGGGACTGGAAAGATGTTAGGAATGAAGTAAACTTCCCAGATACTCGTTCTTTAGCGTCTGAAAGTTGGACTCTGGATCCCATCGACTATTTTGTTGATTGTCACTATTCCGGAGAAGATGAACGACTGTGGGTTATTGGTGGCACAAATGCTGGTGTCTTGGGCTACTTTCCTGTAAATTATGAGGGAGCTGCAAGAATTGGATCTCCGGAAGCAATTCTTGAGGGTGGCCATACTGACGTTGTTAGGAGCGTGCTACCAATGTCAAGGTTACATGGTGGACGCCGCATATTTGGATGGACAGGCGGGGAAGATGGCAAAGTATGTCGTTGGCTGTCCGATGACTCTCCTCAGGTAAATCAATCATGGATTTCAAACACATTCATCATGAGGCCAAAAAAAACTCGCAAGAAAAATCGCCATCAGCCCTACTA 1154 0.4428 METNMAIDVEDEGSSPNPNSHKRFGLKNSIQTNFGDDYVFQIVPKSDWSTMAVSLSTNTVKLYSPEAGQYCGECRGHSSTINQILFSVPSDPHVLSSCSSDGTIKAWDTRTFQQVSCITAGSSQEVFSFSFGGVSGNLIAAGCKSQILFWDWRNKKQIACLEESHVEDVTQVHFVPDQQDKLVSASVDGLICTFDTNGDINDDDHLESVINVETSIAKVGFFGEGYRKLWCLTHIETLGIWDWKDVRNEVNFPDTRSLASESWTLDPIDYFVDCHYSGEDERLWVIGGTNAGVLGYFPVNYEGAARIGSPEAILEGGHTDVVRSVLPMSRLHGGRRIFGWTGGEDGKVCRWLSDDSPQVNQSWISNTFIMRPKKTRKKNRHQPY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03010 384 Gene3D - 125 369 IPR015943 GO:0005515
Bva04g03010 384 ProSitePatterns Trp-Asp (WD) repeats signature. 95 109 IPR019775 -
Bva04g03010 384 Gene3D - 27 124 IPR015943 GO:0005515
Bva04g03010 384 SUPERFAMILY WD40 repeat-like 39 351 IPR036322 GO:0005515
Bva04g03010 384 Pfam WD domain, G-beta repeat 70 108 IPR001680 GO:0005515
Bva04g03010 384 MobiDBLite consensus disorder prediction 1 22 - -
Bva04g03010 384 ProSiteProfiles Trp-Asp (WD) repeats profile. 74 117 IPR001680 GO:0005515
Bva04g03010 384 PANTHER UNCHARACTERIZED 21 384 IPR039328 -
Bva04g03010 384 SMART WD40_4 67 108 IPR001680 GO:0005515
Bva04g03010 384 SMART WD40_4 111 151 IPR001680 GO:0005515
Bva04g03010 384 SMART WD40_4 154 195 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03010 Bva-Chr4 25176280 25178942 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03010 K24758 - gmx:100787377 612.838