Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03009 ATGCTTCCTCTTTCCCTACTCAAGACAGCCCAAGGCCACCCAATGTTGGTGGAACTGAAAAATGGGGAAACTTATAACGGGCATTTGGTTAATTGTGATACGTGGATGAACATCCATCTCCGTGAAGTTATCTGTACCTCTAAAGATGGAGATAGATTTTGGCGGATGCCTGAATGTTACATACGTGGCAATACAATTAAGTACCTTCGAGTTCCCGATGAGGTGATTGACAAAGTTCAGGAAGAAACGAAGAGCCGTACTGATCGCAAGCCACCTGGAGTGGGTCGGGGAAGGGGAAGAGGTAGGGAAGATGGTCCTGCTGGACGCCAAGCAAAGGGAATCGGGCGTGGTCtggatgatggaaatgcaaaGGGAGCAGGTGGAGGCCGAGGCAGAGGTGGACAAGGTGGGAGGGCTGGTGGAAACAGAGGTGCAGGACGAGGAAGAGGGTG 452 0.4956 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGREDGPAGRQAKGIGRGLDDGNAKGAGGGRGRGGQGGRAGGNRGAGRGRG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03009 150 Gene3D - 1 83 - -
Bva04g03009 150 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 138 IPR027141 GO:0006396
Bva04g03009 150 MobiDBLite consensus disorder prediction 79 150 - -
Bva04g03009 150 MobiDBLite consensus disorder prediction 79 109 - -
Bva04g03009 150 SUPERFAMILY Sm-like ribonucleoproteins 3 128 IPR010920 -
Bva04g03009 150 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Bva04g03009 150 Pfam LSM domain 6 70 IPR001163 -
Bva04g03009 150 SMART Sm3 5 71 IPR001163 -
Bva04g03009 150 PANTHER SM-LIKE PROTEIN LSM4 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03009 Bva-Chr4 25173463 25175894 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03009 K12623 - pvy:116139016 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02964 13 21238693 21240675 Bva04g03009 04 25173463 25175894 BWGD