Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03007 ATGGAGGTGATAACCCATTCTTCAACCTTCCTCCTACCTCTTCTTCCGCCGGAGAACCCACCTTCTCTAACCTACGCGCTTGTCGTTCTTAACCAACGCCTCCCAAGATTCGCTCCTCTGCTTTGGGAGCACGCACAGCTACGTGTGTGTGCTGATGGAGGTGCCAACCGGTTGTATGATGAAATGCCTATTCTGTTGGCTCAAGAAGAAGTTTTGCAAGTTCGAAGCAGGTACAAGCCAGACGTAATAAAAGGTGACATGGATTCAATCCGGACAGAAGTACTTGATTTCTATAAAAACTTGGGAACTAAGATAATTGATGAATCTCATGATCAGGATACCACAGATTTGCACAAATGTATAGCATATATACGTGATCTCACACCTAATATTGATAAATCAACACTATGCATTCTAGTTGCTGGAGCACTTGGTGGGCGGTTTGACCATGAGATTGGAAATATCAACGTGCTGTGTCGTTTCTCTGACACACGCATTATCCTTCTATCTGATGATTGCCTCATTCACCTTCTTCCACGGAATCATCGACATAAGATCTGTATTCAATCGTCTGTCGAGGGTCCGCATTGCGGACTCATTCCTATTGGGATGCCATCTAGAAGTACTACAACGACTGGACTCCAATGGGATCTTAATGACACGGAGATGAGATTTGGTGGTTTAATAAGCACATCAAACATTGTAAAAGGAGAGATAGTAACAGTACAATCTGATTCGGATCTACTTTGGACTATTTCTATCAAGAAACCTTA 773 0.4308 MEVITHSSTFLLPLLPPENPPSLTYALVVLNQRLPRFAPLLWEHAQLRVCADGGANRLYDEMPILLAQEEVLQVRSRYKPDVIKGDMDSIRTEVLDFYKNLGTKIIDESHDQDTTDLHKCIAYIRDLTPNIDKSTLCILVAGALGGRFDHEIGNINVLCRFSDTRIILLSDDCLIHLLPRNHRHKICIQSSVEGPHCGLIPIGMPSRSTTTTGLQWDLNDTEMRFGGLISTSNIVKGEIVTVQSDSDLLWTISIKKP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03007 257 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 176 256 IPR036371 GO:0009229
Bva04g03007 257 Gene3D - 166 256 - -
Bva04g03007 257 PANTHER THIAMIN PYROPHOSPHOKINASE 3 255 - -
Bva04g03007 257 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 27 252 IPR006282 GO:0004788|GO:0006772
Bva04g03007 257 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 183 249 IPR007373 GO:0009229|GO:0030975
Bva04g03007 257 Pfam Thiamin pyrophosphokinase, catalytic domain 40 166 IPR007371 GO:0004788|GO:0005524|GO:0009229
Bva04g03007 257 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 11 174 IPR036759 GO:0004788|GO:0005524|GO:0009229
Bva04g03007 257 PIRSF TPK1 2 257 IPR016966 GO:0004788|GO:0005524|GO:0009229
Bva04g03007 257 Gene3D Thiamin pyrophosphokinase, catalytic domain 25 165 IPR036759 GO:0004788|GO:0005524|GO:0009229
Bva04g03007 257 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 255 - -
Bva04g03007 257 SMART TPK_B1_binding_a_2_a 182 248 IPR007373 GO:0009229|GO:0030975
Bva04g03007 257 CDD TPK 26 252 IPR007371 GO:0004788|GO:0005524|GO:0009229
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03007 Bva-Chr4 25161845 25164815 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03007 K00949 - gmx:100795320 431.795