Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03002 ATGTTCCCGACCGGTCTAAGTTGTGCCATTGAAGTTCTGAAGTTTCTCTCTATAGTCGGGCAGAGCTGCTGGGAATTTCCTCCTGCATTGATCATGGACGGGCACGATTCAGAAGACCCAAAGCAAAGCACCGCTGATATGACAGCTTTTGTGCAAAATCTTCTTCAACAGATGCAAACCAGGTTCCAGACTATGTCGGACAACATTGTTACAAAGATTGATGAGATGGGGAACCGCATAACTGAATTGGAGCAAAGCATCAATGATCTGAAAAATGAGATGGGAGTGGAGAGCTCTCCTTCACCTGTGGCCCCTTCTAAGGCAAAGCAAGACGAATCGAACAAGGAAGAGGGTTCAGCTTA 362 0.4641 MFPTGLSCAIEVLKFLSIVGQSCWEFPPALIMDGHDSEDPKQSTADMTAFVQNLLQQMQTRFQTMSDNIVTKIDEMGNRITELEQSINDLKNEMGVESSPSPVAPSKAKQDESNKEEGSA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03002 120 Coils Coil 73 93 - -
Bva04g03002 120 Pfam Heat shock factor binding protein 1 46 93 IPR009643 GO:0003714
Bva04g03002 120 PANTHER HEAT SHOCK FACTOR-BINDING PROTEIN 1-LIKE 32 116 - -
Bva04g03002 120 Gene3D - 40 87 - -
Bva04g03002 120 MobiDBLite consensus disorder prediction 84 120 - -
Bva04g03002 120 PANTHER HEAT SHOCK FACTOR BINDING PROTEIN 1 32 116 IPR009643 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03002 Bva-Chr4 25137562 25139639 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03002 K19765 - gmx:100781854 155.606