Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02996 ATGGCTACCCTCTCTGCTTGCCCTTCTCCTCCTTGGCCAAACCCTAACCCTGATTCTAATCCAAACCCTAACTTTCTGGGTGATCAATCTCAAACGCTTGACTTGGATTCCATAATGCCTCGCCAATCAATCTTGCCTCAACACAAGGGTGTTGACGATGACTCAAACTCTCAAGGCGATACTACTTCCCAAGAATTGCCTGCACCAAAGCCCATGCTGCCTTCGCTGCTCCAACTCTCTTTTAACCAAGATCAAGCTTGCTTCGCTGCCGCCACTGACAACGGATTCCGTATCTACAATTGCGACCCATTCCGAGAGCTCTTCCGCAGAGAGTTCGATGGCGCCAATGGCACTACTTGTGGAATTGGCCATGTCGAGATGCTCTTTCGCTGTAACATACTAGCACTCGTGGGAGGTGGTTCCAATCCCCAGTATCCTCCCAAAAAGATGATGATCTGGGATGATCATCAGGGCAGGTGCATTGGTGAGTTGTCGTTCCGCGCTGCTGTTCGCGGTGTTCGGCTCCGACGAGACcgaataattgtaattttggaGCAGAAGATATTTTTGTACAATTTCGCGGACCTTAAGTTGTTGCATCAGATTGAGACTGTTGCTAACCCGAAGGGGCTTTGCGCAATTTCTCATTTAGCCGATTCTCTGGTGTTGGCATGCCCGGGTTTGCATAAGGGTCAGATTCGAGTTGAGCATTATGCGCTAAAGAGAACCAAATTTATTTCGGCTCATGATTCAAGAATAGCTTGTTTCGCTCTTACACTTGATGGGCAGTTGGTCGCCACTGCCAGCACCAAGGGTACTCTCGTTCGGATTTTTGATACAGTTAATGGCACGCTGCTTCAAGAAGTTAGAAGGGGTGCAAACACGGCAGAGATCTATAGTTTGGCATTCTCTTCTACCGCTCAGTGGCTAGCAGTCTCAAGTGATAAGCGCACTGTCCATGTTTTCAGCCTTAAGGTTAATTCCGGTCCGCCTGCGCATGAAACATCACAAAATACATCTGATTCTGATGCTACCATTACACCGTCTAGTTCATCTCTGtcattcattaaatttaaagGAGTGTTGCCAAAGTATTTCAATTCCGAGTGGTCAGTTGCTCAGTTTCACTTACGTGAGGGCTGTCATTATACTGTTGCTTTTGGTCAACAAAAGAATACTATCATAATCCTTGGCATGGACGGAAGCTTTTATCGATGTCAATTTGACCCAGTGCATGGGGGGGAGATGACTCAGATGGAATATCGCAACTTTCTAAGGCCAGAAACAGCCTG 1292 0.4628 MATLSACPSPPWPNPNPDSNPNPNFLGDQSQTLDLDSIMPRQSILPQHKGVDDDSNSQGDTTSQELPAPKPMLPSLLQLSFNQDQACFAAATDNGFRIYNCDPFRELFRREFDGANGTTCGIGHVEMLFRCNILALVGGGSNPQYPPKKMMIWDDHQGRCIGELSFRAAVRGVRLRRDRIIVILEQKIFLYNFADLKLLHQIETVANPKGLCAISHLADSLVLACPGLHKGQIRVEHYALKRTKFISAHDSRIACFALTLDGQLVATASTKGTLVRIFDTVNGTLLQEVRRGANTAEIYSLAFSSTAQWLAVSSDKRTVHVFSLKVNSGPPAHETSQNTSDSDATITPSSSSLSFIKFKGVLPKYFNSEWSVAQFHLREGCHYTVAFGQQKNTIIILGMDGSFYRCQFDPVHGGEMTQMEYRNFLRPETA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02996 430 MobiDBLite consensus disorder prediction 1 72 - -
Bva04g02996 430 Gene3D - 74 413 IPR015943 GO:0005515
Bva04g02996 430 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 37 430 - -
Bva04g02996 430 Pfam WD domain, G-beta repeat 292 322 IPR001680 GO:0005515
Bva04g02996 430 MobiDBLite consensus disorder prediction 49 65 - -
Bva04g02996 430 PANTHER WD REPEAT PHOSPHOINOSITIDE-INTERACTING-LIKE PROTEIN 37 430 - -
Bva04g02996 430 SUPERFAMILY WD40 repeat-like 74 336 IPR036322 GO:0005515
Bva04g02996 430 SMART WD40_4 282 323 IPR001680 GO:0005515
Bva04g02996 430 SMART WD40_4 239 279 IPR001680 GO:0005515
Bva04g02996 430 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02996 Bva-Chr4 25114959 25119232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02996 K22991 - gmx:100781692 657.521