Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02974 ATGGCAATGGGAGGTAACCGTAACACATGTGAGGTGATCACAAACGAAGCATCTCGACCAAAACAAGAAACTCGTTATCAAATGCCCTCGGGCACAGACAAGGGCAAACAGAAGCAAAACAGAAGAGCTCAACAAGAAGCagaaagggagaagaaaattcaagaagAGCAGAGTGACATTGTAAGTGATAGTATGATTGAAAATGAGAAACCGGAAAGGAAGCCGAAGCCTACATCTGATTTCCTATCAGAGAATTTGGTGGGTGATTCTCATGAATCGCTTGCCCAGAAGTTTGAAAATTACTGTAAAGAAGTGGGATCAACGGCTATACGGGGAGGACAACTGGAGCTTGGTGCCTTGAGACATTGCCTGAAGAAgcatattatgatattttcagGGTCACTCCCCGATGTTGAGATGGGGAAGGAAAGAGTACAAATCTG 443 0.4063 MAMGGNRNTCEVITNEASRPKQETRYQMPSGTDKGKQKQNRRAQQEAEREKKIQEEQSDIVSDSMIENEKPERKPKPTSDFLSENLVGDSHESLAQKFENYCKEVGSTAIRGGQLELGALRHCLKKHIMIFSGSLPDVEMGKERVQI 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02974 147 MobiDBLite consensus disorder prediction 1 88 - -
Bva04g02974 147 MobiDBLite consensus disorder prediction 8 34 - -
Bva04g02974 147 Gene3D - 26 146 - -
Bva04g02974 147 Coils Coil 36 57 - -
Bva04g02974 147 PANTHER DEUBIQUITINASE OTUD6B 75 143 - -
Bva04g02974 147 Pfam OTU-like cysteine protease 87 140 IPR003323 -
Bva04g02974 147 MobiDBLite consensus disorder prediction 35 79 - -
Bva04g02974 147 PANTHER OTU DOMAIN CONTAINING PROTEIN 75 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02974 Bva-Chr4 25010621 25011886 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02974 K18342 - gmx:100819977 142.895