Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02957 atgaagaaggaaaaaacacAAAACGGAGTCCACACTCCGATCACCCACACCTCGTCTCATCATTGTCGGCTgGATACCGAGCTCTTTGAAGACACCCTTGTGCTCCATAGTCCCCTCGTAGAAACCCAGGTGGAAAATTTCAATCTGGACACTGAGATTGTGGAGGATTCAGAGCCCACAGAGAATATGACAACTGTTCCACTATGTGAATATGAACAAGAAGTAGTGATTGATAGCGAGGACGAACAAATGCATGACAGAAAAGTAGCAGCCAAAGTGTTCAAAGATGATGAGACCGTTAGAAATGCGTTGATGGACTTCCAGAAGAGGCAACTCATGCCATCTTGTGAGCAGACACAGGACAGGGAAGCACACTCAAATGCCACCACCTTAGGGAAATCTTCTGTTgGGGACAATGGACCTTCAACCGATGCTCAGAGCTCAGATGACAAGAATTGTCTACTTCTACCTGAAAAGGTAAATCACGAACGCTCTCCAGAACCTGGGGAATTGACCCAGGCCATTGCACTTGAATTTGTGGATCAATTCGTGTCATTCAATAGTCTAATCTTGTCTCAAGGAATTCCCCATAGAATGGCAACTAGAGAGAAATCACCTTCTGTTCCGAGTGCACGAGGGCCACAAAATTTGgcaaacaaaatcaaacttcAGACTCCatatgaagaaaaaggagTCTTCAGATGGGTTGACAATGATCAAAACCACAGCGAAGGTGGTAGTTTTAGTAAGAAGACTGAAGCATCTTCAAATTTTGGAGGTTGTGTACAAACATAtatgaggaaaaagaaaggttgCCATCCGGATAATCAGGGAAACCGTGATACATGCAAATTTGAAGACAAGATAGTGCAAGAACAAGGTACGGTAACTAAAAGCCATAACACTTACAAGGACTTGGATGTTCAGCCAGGAGCAACGAGAGAAAATGCTGAAGCTTGTTTTGGCGTGACACATGCAGAGGACATGCCTGATATTGGTTTAGATACTCAAATAGCTGCTGAGGCTATGGAGACTTTAGCGTACGTGTCCCCTGCTGATTGCCATTTCAATGATGCTCATCATCCTGGGAATAAACTTGATGATTCTCAGAGTGATGCGACAGAGAATAAAGCTCATCTTCAGAATTGTTCGCATGGAAAGAAATCTGGTTTAAAatctatgaaaataaattcaaagaagagaaatgtCTCTGCCTGTAATTTTAGTAAAGTAACCTCTAGTTCTTGCAACCATACTGAGAAGGCGCAACATCCTTTCTtgaggaaaataaagaaaaatatcagaaGCAAGTCTTCTGTTGACAAGCAGTTTGGGAGTAATACGAGTTCACCAATATCTAATGGACGTGTATCACTTGAAGAGGGCCACTCACAGGGAGACTATATTAACTTTACACCtgccaaagaaacaaaaacatggGATTCGGAAAGCAAGTGGACAGGGATCAAAGATCAATCAAGCAGTCACAGAGACATGAACAATAATGTCATGAAGGAAGGTATACCGACATACAAAAGAAAGTGGAATGATTCAATTGCTGATCATGTCCAGTTAAGTGGTGATGGAAAATGTTGGTTGCCTAAAAGTTCACGCCGGATAGCCAGGAAGGGCAGATTGAATTGTCAGATTGAAGCTAGTGCAGAGCTATCTTCAAACGGCAACTCTCTTATATGGCATTTTCCAAAAGGACCAAGAGGGAATAGAAAACGTCCAAAAGTACAAGGTGATCCAAATGGACCTACGAATTTGTGTACTCAGTCTACAATAGTCaatgcaaaagaaatcaaCACCAACTTTAATACAAGTCAGAGATCAACAGAAGGGCAAGATGATATAAGCAAGAAATCATCTTTTCCTTACGCCCCACTTTGTGATGCTTCAAATATTGAAACCGGCAAGTTCCTGTTAAAAGGCATAAAGGTTTCAGATGCTGATAATACTTGTTATGACCTCCATAAAAAGCCGGTCAATAAAAATCTTCCAAAAACTTCCCTTGTGAAAGAGCTCATTAGATTAGCAGTTTCTGAGTCCAGACCAGATAGGATATGGAAAGATTTGAGACAAAGAAGAGATATGACATATGTTCGAGTTATGTTCAGCCAGCATTTGGATGATAGTATCATCAAGCAGCAGAAAAAGATCTTGGCACGGCTGAACGTATCTGTTGCATCAACCTCAATGGAGGCCACGCATTTCATAGCAGATAAGTTTACGCGTACAAAGAATATGTTGGAAACCATGGCTCTGGGTAAATTTGTGGTGACACATTTATGGCTTGAAAGCTGTGGACAAGCAAACTGTTTCATCGacgaaaaaaattacatcctGAGGGAtgtgaagaaggaaaaggaaataggATTTAACATGGCTGTTTCTCTTGCTCGAGCAAGACAACAGCCACTTCTAAAGGGTAAAAAGGTCTTCATCACTCCACACGTCAAACCTGATAAGAAAGTGATGACAACATTGGTTACAGCTGTTCATGGCCAGGTTGTGGATGAAAGTCAGATGTATGCAGACAAGAATGATGAGATCTCAGATGATCTATTGATTCTTTCTTGTGAAGAAGATTATACAATATGTCATCCTTTGCTGGAGAGGGGAATTGCGATTTACTGTTCGGAGCTTGTACTGAATGGAATAGTAACCCAAAAATTGGAACTTGAGAGACATCAACTCTTCatgaatcaaattatgaaGAAGCAGCCCCGCACATTTAATCGGTTTGGGAAGGTTTACAGAAGGCGTTGTGACCGAATGCGGAGCACAGCTGACAACACTGACTGGCCCCAGCGGAATGGATA 2825 0.3904 MKKEKTQNGVHTPITHTSSHHCRLDTELFEDTLVLHSPLVETQVENFNLDTEIVEDSEPTENMTTVPLCEYEQEVVIDSEDEQMHDRKVAAKVFKDDETVRNALMDFQKRQLMPSCEQTQDREAHSNATTLGKSSVGDNGPSTDAQSSDDKNCLLLPEKVNHERSPEPGELTQAIALEFVDQFVSFNSLILSQGIPHRMATREKSPSVPSARGPQNLANKIKLQTPYEEKGVFRWVDNDQNHSEGGSFSKKTEASSNFGGCVQTYMRKKKGCHPDNQGNRDTCKFEDKIVQEQGTVTKSHNTYKDLDVQPGATRENAEACFGVTHAEDMPDIGLDTQIAAEAMETLAYVSPADCHFNDAHHPGNKLDDSQSDATENKAHLQNCSHGKKSGLKSMKINSKKRNVSACNFSKVTSSSCNHTEKAQHPFLRKIKKNIRSKSSVDKQFGSNTSSPISNGRVSLEEGHSQGDYINFTPAKETKTWDSESKWTGIKDQSSSHRDMNNNVMKEGIPTYKRKWNDSIADHVQLSGDGKCWLPKSSRRIARKGRLNCQIEASAELSSNGNSLIWHFPKGPRGNRKRPKVQGDPNGPTNLCTQSTIVNAKEINTNFNTSQRSTEGQDDISKKSSFPYAPLCDASNIETGKFLLKGIKVSDADNTCYDLHKKPVNKNLPKTSLVKELIRLAVSESRPDRIWKDLRQRRDMTYVRVMFSQHLDDSIIKQQKKILARLNVSVASTSMEATHFIADKFTRTKNMLETMALGKFVVTHLWLESCGQANCFIDEKNYILRDVKKEKEIGFNMAVSLARARQQPLLKGKKVFITPHVKPDKKVMTTLVTAVHGQVVDESQMYADKNDEISDDLLILSCEEDYTICHPLLERGIAIYCSELVLNGIVTQKLELERHQLFMNQIMKKQPRTFNRFGKVYRRRCDRMRSTADNTDWPQRNG 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02957 941 MobiDBLite consensus disorder prediction 112 150 - -
Bva04g02957 941 MobiDBLite consensus disorder prediction 111 151 - -
Bva04g02957 941 CDD BRCT_PAXIP1_rpt6_like 808 894 - -
Bva04g02957 941 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 696 783 IPR001357 -
Bva04g02957 941 ProSiteProfiles BRCT domain profile. 723 783 IPR001357 -
Bva04g02957 941 MobiDBLite consensus disorder prediction 439 456 - -
Bva04g02957 941 Gene3D BRCT domain 805 907 IPR036420 -
Bva04g02957 941 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 20 909 - -
Bva04g02957 941 MobiDBLite consensus disorder prediction 360 374 - -
Bva04g02957 941 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 20 909 - -
Bva04g02957 941 CDD BRCT_MDC1_rpt1 702 776 - -
Bva04g02957 941 MobiDBLite consensus disorder prediction 486 501 - -
Bva04g02957 941 MobiDBLite consensus disorder prediction 437 456 - -
Bva04g02957 941 Gene3D BRCT domain 692 804 IPR036420 -
Bva04g02957 941 MobiDBLite consensus disorder prediction 482 502 - -
Bva04g02957 941 SUPERFAMILY BRCT domain 695 797 IPR036420 -
Bva04g02957 941 MobiDBLite consensus disorder prediction 360 391 - -
Bva04g02957 941 MobiDBLite consensus disorder prediction 569 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02957 Bva-Chr4 24917281 24921844 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02957 K14972 - gmx:102659913 872.463