Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02955 ATGACGGGGCTTGTGATGGTGACCAAGGGCGGTGGTTGTGGTGGTGGAAAGGGAACCAAAGGAGCTAAAACCACCGAAGAAGAGCAAAACCAGCTCTCCCTTGTGGCGTTTCTCTTGGCAGCTTTGAGAAAATCCATGGTGGCTTGCCGGGTAGATCGACCCGACGATGTAATCTCATCCGTTCATCAGATGGAAATCGGATGGCCAACCAATGTTCAGCACATCAGTCATGTCACTTTCGATCGCTTCAACGGTTTTCTGGGTTTGCCCGTTGAGTTCGAGGTCGAGATCCCGGGTCGGGTTCCCAGTGCAAGTGTAAGTGTGTTTGGCGTCTCAGCAGAATCCATGCAGTGTTGTTATGATTCAAGAGGAAATAGTGTTCCAACAATCCTGTTGCTGATGCAGGAACGTTTATACACGCAGGGTGGCCTAAAGtcGGAAGGAATATTTCGAATTAACCCAGAAAACAGTAAAGAGGAGCATGTGAGAGACCAATTGAATAGGGGGATTGTGCCAGATGACATTGATGTGCATTGCTTGGCAGGCCTAATTAAGGCCTGGTTCCGTGAGCTTCCTTCAGGAGTGTTAGATGGGCTTTCCCCTGAGCAAGTTCTTCAATGCAACACAGAAGAACAATCTGTTGAGCTTGTGAAACAGCTGAAGCCAACTGAGTCTGCCTTACTCAACTGGGCCATTGATCTCATGGCTGACGTTGTTGAAGAGGAGGAACACAACAAGATGAATGCAAGAAATATAGCAATGGTTTTTGCACCAAACATGACTCAGATGTCTGATCCTCTAACTGCTCTGATGCATGCGGTCCAAGTGATGAACTTGCTTAAGAACTTGATCATGAGGACACTGAGAGAACGTGAAGAAGCAGCAACAGGAGGATATTCGCCCATGTCATTCCATTCATCAGATCGCCAATCCGAGGACGAATATGACAGTCAACAAGAAATGGATACCAGCGGCGAATTGAGAGGGAACAAGTCAGATTATGATAATCATGGTGCTCAATACCGCCAATGcagtgaagaagaagaagaggaagacgGGGAGGGAGAATGCTTAAGTGAGATAGAGGTGTGCTTCTTGAAGCAGTTAGATGAGAAGAAAGGATATTTGCAAGGAGTGTATGCAAGTTGCTCCGTTAACGTGGAATCTTCCATATCATTTACTGGTAGCAAAACTGACGATTCCTGCACTTCttatgaagaaaaatcaaggacCAACGATGTTGATGACACCAGAAATCCATCATCTCCATCAATAGGATATAAGGGCACCAACACCAACGATGTGGAGATGATAGATAAACTAACAGGCTCAGTTTCTCCAGTGTCACTGCTTTCATCTAGTTA 1364 0.4457 MTGLVMVTKGGGCGGGKGTKGAKTTEEEQNQLSLVAFLLAALRKSMVACRVDRPDDVISSVHQMEIGWPTNVQHISHVTFDRFNGFLGLPVEFEVEIPGRVPSASVSVFGVSAESMQCCYDSRGNSVPTILLLMQERLYTQGGLKSEGIFRINPENSKEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEQSVELVKQLKPTESALLNWAIDLMADVVEEEEHNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKNLIMRTLREREEAATGGYSPMSFHSSDRQSEDEYDSQQEMDTSGELRGNKSDYDNHGAQYRQCSEEEEEEDGEGECLSEIEVCFLKQLDEKKGYLQGVYASCSVNVESSISFTGSKTDDSCTSYEEKSRTNDVDDTRNPSSPSIGYKGTNTNDVEMIDKLTGSVSPVSLLSSS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02955 454 CDD CRIB 64 104 - -
Bva04g02955 454 SMART PBD_5 66 100 IPR000095 -
Bva04g02955 454 MobiDBLite consensus disorder prediction 416 433 - -
Bva04g02955 454 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 422 - -
Bva04g02955 454 MobiDBLite consensus disorder prediction 294 355 - -
Bva04g02955 454 Pfam P21-Rho-binding domain 65 94 IPR000095 -
Bva04g02955 454 MobiDBLite consensus disorder prediction 394 433 - -
Bva04g02955 454 Gene3D CRIB domain 60 97 IPR036936 -
Bva04g02955 454 ProSiteProfiles Rho GTPase-activating proteins domain profile. 114 292 IPR000198 GO:0007165
Bva04g02955 454 Gene3D Rho GTPase activation protein 98 294 IPR008936 GO:0007165
Bva04g02955 454 CDD RhoGAP 128 284 - -
Bva04g02955 454 PANTHER MKIAA1688 PROTEIN 1 422 IPR044785 GO:0005096
Bva04g02955 454 SUPERFAMILY GTPase activation domain, GAP 107 285 IPR008936 GO:0007165
Bva04g02955 454 MobiDBLite consensus disorder prediction 401 415 - -
Bva04g02955 454 MobiDBLite consensus disorder prediction 326 344 - -
Bva04g02955 454 SMART RhoGAP_3 125 288 IPR000198 GO:0007165
Bva04g02955 454 ProSiteProfiles CRIB domain profile. 66 79 IPR000095 -
Bva04g02955 454 Pfam RhoGAP domain 128 262 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02955 Bva-Chr4 24903876 24906453 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02955 - - gmx:100807134 619.387