Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02953 ATGATACTCAGAATTCGAAGCCGCGATGGGCTTGAGCGAGTCTCTGTTGATAGCCCACATATCTCAGTTGCACAACTCAAGTCTTTGATTCAATCCCAGCTTCAGATTCCTATACATAATCAAACTATCTCTACCAACCAAAACCTTCTGCTTGCTAAGACCCATGAAGATCTTCTCCGATTCACCGACATGGCCAACCCCGATACTCCTCTTTCTGCCCTCAATATCTCTCATGGATCGATCGTATTTTTGTCTTACGAGGGAGAACGTAGGGTTGCTGGGCCAGCGTTTAATCCTGCTGGCTCCTTTGGCCGGAAGATGACCATGGATGATCTGATAGCGAAACAAATGCGAGTGGCGCGACAAGAAAACCCGCATTGCGAATTGGTTTCCTTCGACCGGGATTGTGCCAACGCATTTCAGCATTATGTGAATGAGACCCTTGCCTTTGCAATAAAAAGAGGAGGGTTTATGTACGGAACGGTGTCGGAGGAGGGGAAAGTTGAGGTCAATTTTATATACGAGCCACCCCAGCAAGGTTCCGAGGAGAATCTATTGCTTTTCAGAGACCCTGATGAAGAAAAGTTGGTGGAAGCGATTGCGGCAGGGTTGGGGATGAGGAAAGTTGGCTTTATATTCACGCAGACTATTAGTCAggataaaaaagattatactTTGTCGAACAGGGAAGTTCTTCAAGCTGCAGAACTTCATGCTGAGAGTGGGTTGAAGGAATGGGTGACGGCAGTAGTGAAGCTAGAGGTGAATGAGGATGGGGCCGGTGCTGACGTTCACTTCGAAGCGTTTCAGATGAGTGATATTTGTATTAGATTGTTCAAGGAAGGGTGGTTTGAGACAGATATTGGTCAAGAGGATGATCCCAAGTTgtcaaaaatgaagaaagatgtaGTGGTTGGAGTTAAGGATACTAAAGAGGTCGATAATGATTTCTTCTTGGTGGTGGTAAAAATTTCCGATCATCAGGGTCctctttcatcatcatttcCCATTGAGAACCGAAATACACAATTAGAGATGAGGGCGCTGAAGAATCATCTGGACCGAACCAAAAATGTTCCATTTGTAAAGCGAATTTCtgattttcatcttcttctggtACTGGCAAGGGTTTTAGACCCAGCTGCTGATATTCCTGCGCTGGCAGAATGCGTGCAGACACAGACTACAGTACCGGAAGGTTACCAGCTCCTGATCGAGTCCTTGGCCAGTACTGCTTG 1238 0.4378 MILRIRSRDGLERVSVDSPHISVAQLKSLIQSQLQIPIHNQTISTNQNLLLAKTHEDLLRFTDMANPDTPLSALNISHGSIVFLSYEGERRVAGPAFNPAGSFGRKMTMDDLIAKQMRVARQENPHCELVSFDRDCANAFQHYVNETLAFAIKRGGFMYGTVSEEGKVEVNFIYEPPQQGSEENLLLFRDPDEEKLVEAIAAGLGMRKVGFIFTQTISQDKKDYTLSNREVLQAAELHAESGLKEWVTAVVKLEVNEDGAGADVHFEAFQMSDICIRLFKEGWFETDIGQEDDPKLSKMKKDVVVGVKDTKEVDNDFFLVVVKISDHQGPLSSSFPIENRNTQLEMRALKNHLDRTKNVPFVKRISDFHLLLVLARVLDPAADIPALAECVQTQTTVPEGYQLLIESLASTA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02953 412 CDD MPN_NPL4 118 374 IPR007717 -
Bva04g02953 412 Gene3D - 1 100 - -
Bva04g02953 412 Coils Coil 339 359 - -
Bva04g02953 412 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 2 92 IPR016563 GO:0006511
Bva04g02953 412 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 101 410 IPR016563 GO:0006511
Bva04g02953 412 CDD Ubl_AtNPL4_like 1 85 - -
Bva04g02953 412 Pfam NPL4 family 156 239 IPR007717 -
Bva04g02953 412 Pfam Nuclear pore localisation protein NPL4 1 84 IPR024682 -
Bva04g02953 412 ProSiteProfiles MPN domain profile. 129 275 IPR037518 -
Bva04g02953 412 SUPERFAMILY Ubiquitin-like 1 88 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02953 Bva-Chr4 24894269 24897609 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02953 K14015 - gmx:100811623 699.893