Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02947 ATGAGTTCAGAAGCTGCAGCTACAACCACCAAGGGAGGCAGAGGCAAAGCCAAGGCTAACAAAGCCGTGTCCAGGTCTCAGAAGGCTGGTCTTCAGTTTCCCGTTGGCAGAGTTGCTCGCTACCTCAAAACGGGTCGATATTCTCAGCGGGTTGGATCCGGATCTCCGGTTTATCTCTCTGCCGTTCTTGAGTATCTCGCTGCCGAGCTTTTGGAATTGGCTGGGAATGCTGCGAGAGATAACAAGAAGAACAGAATAATCCCCAGGCACATTCAACTTGCGGTGAGGAATGACGAGGAATTGAGCAAGCTCTTGGGATCTGTGACCATTACAAATGGAGGAGTGCTGCCCAACATACACCCGAACTTGTTACCCAACAAGGCTGTAAAGGGAAAGGCGGAGGTTGGGTCTGCTAGTCAGGAATTTTA 428 0.507 MSSEAAATTTKGGRGKAKANKAVSRSQKAGLQFPVGRVARYLKTGRYSQRVGSGSPVYLSAVLEYLAAELLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTITNGGVLPNIHPNLLPNKAVKGKAEVGSASQEF 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02947 142 PANTHER HISTONE H2A 7 140 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva04g02947 142 PANTHER HISTONE H2A 7 140 - -
Bva04g02947 142 Pfam C-terminus of histone H2A 99 132 IPR032454 -
Bva04g02947 142 Pfam Core histone H2A/H2B/H3/H4 11 96 IPR007125 GO:0003677
Bva04g02947 142 PRINTS Histone H2A signature 79 93 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva04g02947 142 PRINTS Histone H2A signature 107 125 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva04g02947 142 PRINTS Histone H2A signature 21 43 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva04g02947 142 PRINTS Histone H2A signature 50 65 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva04g02947 142 PRINTS Histone H2A signature 65 78 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva04g02947 142 MobiDBLite consensus disorder prediction 1 27 - -
Bva04g02947 142 SUPERFAMILY Histone-fold 13 131 IPR009072 GO:0046982
Bva04g02947 142 SMART h2a4 10 130 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva04g02947 142 Gene3D Histone, subunit A 8 136 IPR009072 GO:0046982
Bva04g02947 142 CDD H2A 11 127 IPR002119 GO:0000786|GO:0003677|GO:0030527
Bva04g02947 142 ProSitePatterns Histone H2A signature. 29 35 IPR032458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02947 Bva-Chr4 24876102 24876787 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02947 K11251 - twl:119982912 205.682