Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02940 ATGAAGAAAGGCAAGGGAAGGAACAACGGCTTGTTGCCCAATTCATTGAGGATTATCTCTTCTTGCCTTAAGACTGTGTCTACCAATGCTAGCACCGTTGCTTCCACTGTACGCTCTGCTGGCGCTTCTGTTGCTGCTTCCATCTCTTCTGCTTCTGAGGATAACAAAGATCAGATAACTTGGGCTGGTTTTGATAGGCTAGAGCTTGATTCTTCAAGCTTCAAGAATGTTCTTTTGCTTGGTTATATGAATGGATTTCAAGTTCTTGATGTGGAGGATGCCTCTAACTTCAGTGAACTGGTGTCCAAGCATGGTGGTCCAGTTTCTTTCTTACAGATGCAGCCCTGCCCTGTATTTTCTGATGGGAAGGATGGATTCAGAAAATCACATCCTTTACTGCTGGTTGTTGCTGGGTATGACACTGGCAGTATAAGCCAAAACCGAACCCATTTGGGTGGTTTAGGAAGAGACAATAATGTAGAAACCCAGTATGGAAGCTGTATCAACTCTCCAACAGCTGTCCGATTTTACTCCTTGAAGTCCCATTCTTATGTTCATGTTCTTAGATTTCGGTCAACAGTATGTATGATAAGATGCAGTCCTCGGATAGTAGCGGTTGGTCTTGCCACACAAATATACTGCTTCGATGCATTGACTCTTGAGAATAAATTCAGTGTTCTCACCTATCCTATTCCTCAGTTAGCGGGACAAGAAACAATGGGTGTTAATGTTGGTTATGGTCCAATGGCTGTGGGCCCTAGGTGGTTAGCATATGCTTCCAACAACCCATTGCCCTTAAATAATGGTCGCTTAAGCCCACAAAACCTCACCCCCTCTCCTGGATTTAGTCCTTCAACATCTCCAGACAGTGGTAATTTGGTGGCTCGCTATGCAATGCAATCCAGCAAACATTTGGCAGCAGGAATAATTAAATACTGTCAAGAGCTACTTCCTGATGGTTCTAGTTCTCCAATACAATCAAATTCAAGCTGGAAAGTTGGTAGGGCTTCAGGAATTGATGTGGACAATGCAGGAATGGTTGTGGTGAGAGATTTTGTTTCCAAAGCTGTCGTCTCACAGTTTAAAGCGCATACTAGCCCTATATCTGCACTTTGTTTTGACCCTAGCGGAACCCTTCTGGTCACCGCCTCGGTTTATGGGAACAGCATTAAAATCTTCCGGATAATGCCATCACGCACAAGCAAGGGATCTGGTGTTCTAGGCTATGACTGGAGCACTTCTCACGTACATCTTTATAAACTTCACCGTGGAATAACATCAGCTaTTATTCAGGACATTTGTTTCAGTCAGTTCAGTCAGTGGGTTGCCATTGTCTCATCTAAGGGGACTTGTCATCTTTTCGTTTTGTCCCCATTTGGTGGTGATACTGGTTTCCGACTTATTAATTATCAGGGTGAGGAGCCCTCCTTACTTCCAGTTTTATCACTACCGTGGTGGTCCACTTCATCTTCCATCAATTATCAGCAATCTTTGCCTCCTCCAGCACCTATTGTCCTTTCTGTCGTGAGCAGGATAAAATATAGCAGTTTCGGATGGCTTAACACAGTTCATAGTTCCAATGCTTATGCAACAGGAAAAGTGTTTGTGCCATCTGGTGCTGTTGCTGCCGTTTTTCATAATTCTTTATCTCACTCACAGCAGCATGCTAACTCAAAGAGGAAATCATTAGAGCATCTATTAGTATATACTCCATCAGGTCATGTAGTTCAACACGAACTTCTACCATCTGTTGGTCCTGAACCAGGTGATGATGGAACGAGAACCCAGCCAGCTTCACTTCTGCATATGCAGGAGGATGAGTTCAGAGTGAAAGTTGAACCTATTCAGTGGTGGGATGTCTGTAGAAGGTCAGAATGGTCTGAAAGAGGGGTTCCTTGCTCCAATACCTCTGAGAGACAAGATGGTTCTCCAGATAAAACATTTTCTGGTGATGGCTATGGATTGGATTTTCTAGATGTAGATGACAGTGTGGGGGAAAAGAAGATAGTAACATGTTCTACTGGAAAGCCTCAAGAGAGATCCCACTGGTACCTCTCTAATGCTGAGGTGCAAGTGAACTTTGGAAGGGTTCCTATATGGGAAAAGTCTAAGATTTGCTTCTATACGATGGGTTTTGCAATTAATCCTCATACTGGTGGAgagattgaaattgaaaaggtCTCTGCTATTGAAGTTGAGATAAAAAGGAGGGAGTTATTGCCTGTTTTTGACCATTTCCACAGCATCAGACCAAGCTGGAATGAGAGGGGTATTGCTTCGGGAAGATTTTTGAATCCTACAGTTTCTCATCAGGCTGAAGACAGGGCAACTGCTGACGTGACTGTCATTTGTCACTCTAAGCCAGCGTCACTTTGCTCCACCGAGAGCTCTGATGGCGGTTCATCAAGAAGAATTGAAAATCTGCCTGACCTGGTTGGTGATTTCTACCTGGAAAGAATGGGGACAACCAATTTTGAACCTTCCCTGCATAACCAGATTTTGCTGGATAGTTCGTCTTCTCCAACTGGAAACTCGAAGCATGTTGATTCTCATGTCAACAATTATATCACAAGCTGTCCATCATTGCAAGGGAGAAAGATAACTTCTGCACACAGAGATATTGCACAAGGTGCTGAGATCATTGATGACCCGGCACCGATCTTGGACCAGCATGCTTCAGATAGGAGAAAACTGGTGGAAGTGCCTTCAAACAATGCAGTTGTAGGGCAATCTTTTCAGGATGGCCACTGCAAGACACTAGAGCACCATGAAGGTGACGTGTTAACTGAAGTTGCAACTGATGATGTTAACAGCAACAGTAGCCACCATGAAAGAGAGCAAGCCGAGGAGGGTGGGGATGATGATGAATTCCTTGGCGACATGTTTGCCTTTTCTGAAGAAGGTTG 2906 0.4381 MKKGKGRNNGLLPNSLRIISSCLKTVSTNASTVASTVRSAGASVAASISSASEDNKDQITWAGFDRLELDSSSFKNVLLLGYMNGFQVLDVEDASNFSELVSKHGGPVSFLQMQPCPVFSDGKDGFRKSHPLLLVVAGYDTGSISQNRTHLGGLGRDNNVETQYGSCINSPTAVRFYSLKSHSYVHVLRFRSTVCMIRCSPRIVAVGLATQIYCFDALTLENKFSVLTYPIPQLAGQETMGVNVGYGPMAVGPRWLAYASNNPLPLNNGRLSPQNLTPSPGFSPSTSPDSGNLVARYAMQSSKHLAAGIIKYCQELLPDGSSSPIQSNSSWKVGRASGIDVDNAGMVVVRDFVSKAVVSQFKAHTSPISALCFDPSGTLLVTASVYGNSIKIFRIMPSRTSKGSGVLGYDWSTSHVHLYKLHRGITSAIIQDICFSQFSQWVAIVSSKGTCHLFVLSPFGGDTGFRLINYQGEEPSLLPVLSLPWWSTSSSINYQQSLPPPAPIVLSVVSRIKYSSFGWLNTVHSSNAYATGKVFVPSGAVAAVFHNSLSHSQQHANSKRKSLEHLLVYTPSGHVVQHELLPSVGPEPGDDGTRTQPASLLHMQEDEFRVKVEPIQWWDVCRRSEWSERGVPCSNTSERQDGSPDKTFSGDGYGLDFLDVDDSVGEKKIVTCSTGKPQERSHWYLSNAEVQVNFGRVPIWEKSKICFYTMGFAINPHTGGEIEIEKVSAIEVEIKRRELLPVFDHFHSIRPSWNERGIASGRFLNPTVSHQAEDRATADVTVICHSKPASLCSTESSDGGSSRRIENLPDLVGDFYLERMGTTNFEPSLHNQILLDSSSSPTGNSKHVDSHVNNYITSCPSLQGRKITSAHRDIAQGAEIIDDPAPILDQHASDRRKLVEVPSNNAVVGQSFQDGHCKTLEHHEGDVLTEVATDDVNSNSSHHEREQAEEGGDDDEFLGDMFAFSEEG 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02940 968 MobiDBLite consensus disorder prediction 950 968 - -
Bva04g02940 968 MobiDBLite consensus disorder prediction 934 968 - -
Bva04g02940 968 SMART WD40_4 354 394 IPR001680 GO:0005515
Bva04g02940 968 SMART WD40_4 412 455 IPR001680 GO:0005515
Bva04g02940 968 PANTHER AUTOPHAGY-RELATED PROTEIN 18H 6 967 - -
Bva04g02940 968 Gene3D - 55 476 IPR015943 GO:0005515
Bva04g02940 968 SUPERFAMILY WD40 repeat-like 72 454 IPR036322 GO:0005515
Bva04g02940 968 Pfam Breast carcinoma amplified sequence 3 501 741 IPR022175 -
Bva04g02940 968 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 6 967 IPR045142 GO:0006914
Bva04g02940 968 MobiDBLite consensus disorder prediction 629 643 - -
Bva04g02940 968 MobiDBLite consensus disorder prediction 269 288 - -
Bva04g02940 968 MobiDBLite consensus disorder prediction 629 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02940 Bva-Chr4 24843586 24843786 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02940 - - gmx:100785780 1295.8