Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02927 ATGGATAAGCCATCCTCTAATTCTTCACACCCCTCCCCTTCTTCCCCGCCTGCAACAATCTCATCAACATCGATCACCGAGACTGTTTGGGGTAATCACCACTTCAAGATCACGGGCTTTTCCTTATCAGAAGGAGTTGGGATTGGGAGATACATAGCATCTGATATGTTTTCGATTGGATTGGAGGGTATGATTGGGAGATCTTCTTTTACCCCGACGGGAAGAGCGTCGAGCATAATGAGCGGGAAGGATATTCATTTTGAGAGGAAGCTTGAAACTCCATACACCTTAAAATGCCGCGGTAGCATGTGGGGATACAAGCGGTTTTTCAAGAAAACAGAGCTGAAGAAATCTGACTATCTAAAAGATGACTGCCTCCTTGTTAACTGCAGTGTTGGTGTTGTGAGGTCTGTGACGGAGGGCCCTAAAATTTTCTCCATAGCAATGCCTGATTGTAACATGGAGCAGGAGGAAAAGACGAAACAACAGCTGGACTCCGTACTCTG 506 0.4605 MDKPSSNSSHPSPSSPPATISSTSITETVWGNHHFKITGFSLSEGVGIGRYIASDMFSIGLEGMIGRSSFTPTGRASSIMSGKDIHFERKLETPYTLKCRGSMWGYKRFFKKTELKKSDYLKDDCLLVNCSVGVVRSVTEGPKIFSIAMPDCNMEQEEKTKQQLDSVL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02927 168 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 67 142 IPR008974 GO:0005515
Bva04g02927 168 CDD MATH 31 132 IPR002083 GO:0005515
Bva04g02927 168 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 85 156 - -
Bva04g02927 168 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 14 60 IPR045005 GO:0016567
Bva04g02927 168 MobiDBLite consensus disorder prediction 1 22 - -
Bva04g02927 168 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 14 60 - -
Bva04g02927 168 SUPERFAMILY TRAF domain-like 28 139 - -
Bva04g02927 168 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 85 156 IPR045005 GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02927 Bva-Chr4 24782339 24783740 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02927 K10523 - gmx:100811065 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02927 04 24782339 24783740 Bva13g02867 13 20782686 20786505 BWGD