Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02925 ATGTTGTTCTTCTCGTACTTCAAGGATTTGGTTGGAAGAGAAGTAACTGTCGAGCTCAAGAACGATTTGGCGATTAGAGGGACTTTGCATTCAGTTGATCAGTACCTTAACATCAAGCTAGAGAACACTCGGGTTGTTGATCAAGACAAGTACCCCCATATGCTATCAGTAAGGAACTGCTTCATCAGAGGGTCAGTGGTGAGATATGTGCAATTACCTCCAGAAGGTGTGGACGTTGAACTATTGCATGACGCCACAAGGAGAGAGGCTCGGGGAGGTTA 281 0.4555 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDVELLHDATRREARGG 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02925 93 PIRSF Lsm2 1 93 IPR016654 GO:0006397
Bva04g02925 93 PANTHER SNRNP CORE PROTEIN FAMILY MEMBER 1 91 IPR016654 GO:0006397
Bva04g02925 93 CDD LSm2 2 90 IPR016654 GO:0006397
Bva04g02925 93 SUPERFAMILY Sm-like ribonucleoproteins 3 92 IPR010920 -
Bva04g02925 93 Gene3D - 1 92 - -
Bva04g02925 93 Pfam LSM domain 7 71 IPR001163 -
Bva04g02925 93 SMART Sm3 5 72 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02925 Bva-Chr4 24772440 24775278 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02925 K12621 - sind:105163231 189.504