Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02920 ATGTTACTGCTGGATGCCTTGAACCTTGCTCGGAAGGTGTTTCCGCCGGACATCGTGTACGATGCTGACGATATTCGGTTCCCCACTTTTTGGTGGTTCACTTATGCTGGAATTTCCTGTTTTCTTGTCATCTTCGCTGGTATTATGTCTGGTCTTACCCTCGGATTAATGTCTCTTGGCCTTGTTGAGCTTGAAATTCTCCAGCGTAGTGGCACCTCCACTGAGAAAAAACAAGCTGCTGCTATTTTACCGGTAGTTCAAAAACAGCATCAGCTGCTTGTTACTTTGCTTCTTTGTAATGCTGCTGCCATGGAGGCACTTCCACTCTAccttgataaaatttttcatccatTTGTAGCTGTCTTGTTGTCTGTAACCTTTGTTCTAGTTTTTGGAGAGATTATCCCACAAGCAGTATGTTCAAGATTTGGGCTATATGTTGGTGCAAACTTTGTGTGGCTTGTGCGTGTTCTGGTGATCATATGCTATCCAATTGCTTTCCCTATTTCAAAGGTCCTGGATGCCGTACTTGGACATGATGATGTGTTGTTTAGGCGAGCACAATTGAAAGCCCTTGTTTCCATCCATAGCCAAGAGGCTGGTAAAGGGGGTGAACTCACACATGATGAGACAACAATTATAAGTGGAGCACTAGACCTTACCGAGAAGACAGCAGAGGAGGCAATGACACCAATTGAATCAACATTTTCCTTGGATGTTGATTCCAAATTGAACTGGGAAGCAATTGGGAAAATTCTTGCACGAGGACATAGTCGTGTCCCTATTTATTCGGGGAATCCCAAGAATGTAATTGGCCTGTTATTAgtAAAAAGTCTTCTTACTGTAAGAGCTGAAACAGAAACTCCAATTAGTGCTGTTTCCATCAGGAGAATTCCTAGGGTTCCGGCAGATATGCCTTTATATGATATCCTCAATGAGTTTCAGAAAGGAAGCAGTCATATGGCAGCTGTAGTTAAGGTTAAAAGAGAGAGCAGTAATCCTCAGGCTGCTATTGACGCACAGAACTCTGACAATAACAAAACCACGAATCACAATACTGAACTAACCATGCCATTGCTAACCAATTCTTTTGAGAAAACAGAAAACGTTGTCATTAATATTGATAAACCTCCAAGGTGTACATCAGaggaacaaaattttcaacaaaatggCATCCAACACTTGCCAGATAATCTTGAAGATGGGGAAGTTATTGGCATCATAACCTTGGAAGATGTTTTTGAAGAACTCCTGCAGGAAGAAATAGTGGATGAGACAGATGAATATATTGATGTACATAAGAGAATACGTGtagctgctgctgctgcagcTGCCTCATCTGTCGCACGAGCTCCCTCCGGTCGAAAGTTGATATCCCACAAGCCTGCTACTGGGAACCAGGCAAGCAGAGGCAAGCATTG 1421 0.4089 MLLLDALNLARKVFPPDIVYDADDIRFPTFWWFTYAGISCFLVIFAGIMSGLTLGLMSLGLVELEILQRSGTSTEKKQAAAILPVVQKQHQLLVTLLLCNAAAMEALPLYLDKIFHPFVAVLLSVTFVLVFGEIIPQAVCSRFGLYVGANFVWLVRVLVIICYPIAFPISKVLDAVLGHDDVLFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVDSKLNWEAIGKILARGHSRVPIYSGNPKNVIGLLLVKSLLTVRAETETPISAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVKRESSNPQAAIDAQNSDNNKTTNHNTELTMPLLTNSFEKTENVVINIDKPPRCTSEEQNFQQNGIQHLPDNLEDGEVIGIITLEDVFEELLQEEIVDETDEYIDVHKRIRVAAAAAAASSVARAPSGRKLISHKPATGNQASRGKH 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02920 473 CDD CBS_pair_CorC_HlyC_assoc 224 325 IPR044751 -
Bva04g02920 473 ProSiteProfiles CNNM transmembrane domain profile. 28 210 IPR002550 -
Bva04g02920 473 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 465 IPR045095 GO:0010960
Bva04g02920 473 SUPERFAMILY CBS-domain pair 214 419 IPR046342 -
Bva04g02920 473 Gene3D - 352 425 IPR046342 -
Bva04g02920 473 PANTHER BNAC05G01850D PROTEIN 1 465 - -
Bva04g02920 473 MobiDBLite consensus disorder prediction 451 473 - -
Bva04g02920 473 Pfam Cyclin M transmembrane N-terminal domain 38 209 IPR002550 -
Bva04g02920 473 Gene3D - 210 343 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02920 Bva-Chr4 24743001 24747520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02920 K16302 - vvi:100259602 700.664