Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02908 ATGAAAGAACAGGACTTGTCGTCTGAACCACTGACACCTCCACCAAATAACGACGTGCCAGTTCCTGCTGCTGCTGATAATGGTAATGCTCACTATCAAAACCAATTCAATGGCTATGAAGTTGCAGACCTGCATGAATTGGCTAGAGCTCCCAGGGTGAAGGAATTGGAGTTTACCCAAACTAGGAACATAAAGATGATATTCAACGATGAAGAGGAAAGTGGGCCTCCTAGACCCGCACAAGAGCCCAAGAAAGATTCTTGCCCAAATAATTTCTATGCTTGTGATTCCAGTGAGTGTCATTCCCATATTAAAGCCCAACATGAGCCCAGGAAAGGTGGTGGCCCAAGTCATTGTAATTCTGCTGCTCCCGCCCTAGTAAATCTTCTCCCTTTGGAGGCTCGATCGCTGCCCACCATGAAGCTTGTCAGGTTTTTGATGAAGTTGAACAACGAAACTGTATCAATCGAGCTCAAGAACGGCACTATTGTTCATGGCACCATTACAGGTGTCGATATCAGTATGAATACACATTTGAAAACAGTTAAGCTAACACTGAAAGGGAAAAATCCAGTGACACTGGATCATCTCAGTGTGAGGGGTAACAACATCCGTTATTACATCCTTCCTGACAGCTTGAATCTTGAGACCTTGCTGGTTGAAGAGACACCTAGGATCAAGCCCAAGAAGCCTACTGCTGGGAAGCCTTTGGGCCGGGGCCGTGGCCGAGGACGCGGACGTGGTCGTGGCCGTGGCCGTTG 761 0.4757 MKEQDLSSEPLTPPPNNDVPVPAAADNGNAHYQNQFNGYEVADLHELARAPRVKELEFTQTRNIKMIFNDEEESGPPRPAQEPKKDSCPNNFYACDSSECHSHIKAQHEPRKGGGPSHCNSAAPALVNLLPLEARSLPTMKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRIKPKKPTAGKPLGRGRGRGRGRGRGRGR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02908 253 SMART Sm3 144 209 IPR001163 -
Bva04g02908 253 MobiDBLite consensus disorder prediction 224 253 - -
Bva04g02908 253 SUPERFAMILY Sm-like ribonucleoproteins 143 252 IPR010920 -
Bva04g02908 253 MobiDBLite consensus disorder prediction 67 87 - -
Bva04g02908 253 MobiDBLite consensus disorder prediction 1 31 - -
Bva04g02908 253 MobiDBLite consensus disorder prediction 232 253 - -
Bva04g02908 253 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 140 249 IPR027141 GO:0006396
Bva04g02908 253 CDD Sm_D1 141 232 IPR034102 GO:0000387
Bva04g02908 253 Gene3D - 136 224 - -
Bva04g02908 253 Pfam LSM domain 144 208 IPR001163 -
Bva04g02908 253 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1 140 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02908 Bva-Chr4 24694524 24699123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02908 K11087 - gmx:100819089 195.282