Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02888 ATGGAGCTCAGTAAGGTGACGCTCGAGATCTTCTCCAAACTGGAGCAAAAATGGCTATCCCACTGCGAAACCACCAAGAAAACCCGCATACTCAGCATTGACGGCGGTGGAACCACTGGCATTGTCGCCGGCACTGCCCTCATCCGCCTCCAGGATCAGATCCGTCTCCAGACCGGCGATCCTCACGCTCAAATAGTCGACTTCTTCGATATCATTGTTGGTACCGGCATTGGCGCTCTCCTTGCAGCCTTGATCACTGCAGACGACGGTTCTGGCAGACCTCTGTATACTGCTACCGACGCCGTTGATATCATTACTCAGAGGAATTCCGAACTCTACAAACCTAAACCTGCTGGAATTTTCCGTCGGCACAGAAGATTCTCTGCGAGGAGCATGGATAGTGCGTTAAAGGAAGTATTCCAGAAGAAAGAGGATGGAGGGATGTTGACGTTGAAAGACACTTGTAAACCCCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTCTTTTCTCGAGCCGACGCATCCGAATCCCCGAGCTTCAACTTTGAACTCTGGAAAGTATGCCGCGCTACAACTGCCACGCCGAGCCTTTTCAAGCCGTTTGAACTTACTTCCGTTGACGGCAAGACCTCGTGCACCGCCGTTGACGGCGGTCTCGTGATGAACAATCCAACGGCTGCTGCAGTTACGCACGTGCTGCACAACAAGCGTGATTTTCCATCGGTTAACAGCGTCGAGGATCTCTTGGTCCTATCCTTGGGGAATGGTCCTTCTGGACGGGACCCGTGTCCCGACGGCAAGTGCTCGACCTCGTCGGTTGTTAACATTGTGCTGGATGGTGTTTCCGAGACCATTGACCAAATGTTGGGGAACGCTTTCTGCTGGAACCGTATGGACTACATCAGAATCCAGGCTTTCGGTTTGGGAAGCGAGGGAACGacggaggaggaggaggatgTGCTGAAAGAGAGGGGAGTGGAATCGTTACCGTTTGGCGGGAAGCGGTTATTGACGGTGACTAACGGCCAGAGAATAGATAGCTTCGTGCAGAGTCTTATCGCTTCAGGAAAGACCAGCCTACCTCCCAGTCCCTGCAAGGAATCCACCGTTAACCCTCTCGCTGACGGTCGCTA 1145 0.5205 MELSKVTLEIFSKLEQKWLSHCETTKKTRILSIDGGGTTGIVAGTALIRLQDQIRLQTGDPHAQIVDFFDIIVGTGIGALLAALITADDGSGRPLYTATDAVDIITQRNSELYKPKPAGIFRRHRRFSARSMDSALKEVFQKKEDGGMLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATTATPSLFKPFELTSVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNSVEDLLVLSLGNGPSGRDPCPDGKCSTSSVVNIVLDGVSETIDQMLGNAFCWNRMDYIRIQAFGLGSEGTTEEEEDVLKERGVESLPFGGKRLLTVTNGQRIDSFVQSLIASGKTSLPPSPCKESTVNPLADGR 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02888 381 MobiDBLite consensus disorder prediction 362 381 - -
Bva04g02888 381 CDD Pat17_PNPLA8_PNPLA9_like 30 309 - -
Bva04g02888 381 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Bva04g02888 381 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 381 - -
Bva04g02888 381 PANTHER PATATIN-LIKE PROTEIN 6 1 381 - -
Bva04g02888 381 Gene3D Cytosolic phospholipase A2 catalytic domain 17 364 - -
Bva04g02888 381 SUPERFAMILY FabD/lysophospholipase-like 26 310 IPR016035 -
Bva04g02888 381 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02888 Bva-Chr4 24608041 24610155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02888 1 381 Acyl Lipid Metabolism Gene Families AT3G63200 71.576 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02888 - - cpap:110814795 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02888 04 24608041 24610155 Bva13g02831 13 20573751 20575711 BWGD