Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02886 ATGTCTGCTTCTGTGATGTCCATTCAGAATCTTCGTGTTTGGATTCCTCCtacttgttcttcttcttcagtgCCACCTCCcgttttctcttctcctttctctgTTCTTCTTGCATGCTCCAATAATAACTCTTCTGCAGGTTTAACCAAAAGGGCCCTCCTAGTTAAAGACAGGCATGGGGACTGCAGGTTTCGGCTAACATGCAACGTGTTGTCTCGTTTTCAGATTGAAGACAATGCTCAAGTTTATCCAGATAGTATTCCAGCAGCTTTTTTATGGCATGATCAGGAGACGCTCAAAGAGTACAACATAGAACAGGAATCTCTTTCTCAGgtTAATTTTGTGACAAACGAGATCAGAAAACGGATACATGCTGCGAAATCAATGTTGGGGTCCATGGAAGATGGAGAGATAAGCATCTCAGCTTATGACACTGCTTGGGTTGCTCTAGTAAAGCACATTGATGGAAGTGACAGACCTCAATTCCCCGAATGCTTAGAATGGATTGCTAACAATCAGCTTCCTGATGGGTCTTGGGGTgattctcaattatttttggcaCATGATAGGATTATTAACACCTTGGCCTGTGTTGTTGCATTGAAGACTTGGAATATTCATCcagaaaaatgtgaaaaaggaatgaaattttttgaagaaaatctgAGCAAGCTTGTGGACGAGAATGATGAGCATATGCCAATCGGCTTTGAAGTTGCTTTTCCTTCACTTCTGGACATAGCTGGAAGTTTAGGCATTCAAGTGCCTGTTGATTCTCCCATCTTGAAAGAAATCTTTGCAGCCAGGGATCTAAAgctaaaaaaAATACCCAAGGACATATTGCATAAGGTGCCGACAACACTGCTTCATAGCTTGGAGGGTATGAAAGATTTGGACTGGAAAAAGCTTCTAAAATTGCAGTCCCGAGATGGgtcattcttattttctccATCCTCCACCGCTTTCGGGCTCATGCAGACCAAAGATGAAAATGCTCTAAATTACTTAACCAAAATAGTGAAGAGATTTAATGGGGGAGTTCCAAATGTGTACCCTGTGGACTTGTTTGAACACGTTTGGGTTGTTGATCGACTACAGCGTCTGGGAATTTCAAGATATTTTGAGCAAGAGATCAAGGAATGCATGAACTATGTGAGCAAGTATTGGACTGACAAGGGTATTTGCTGGGCAAGAAATTCTGAGGTTCAAGACATTGATGACACAGCCATGGGATTTAGACTACTTCGGCTGCATGGCCACCAAGTTTCATCCAGTGTGTTTCATCATTTTGAGAAGAACGGTGAATTCTTCTGCTTTGCTGGGCAGTCGAGTCAAGCAGTGACCGGAATGTTCAATCTGTATAGAGCTTCTCAGGTGTTACTTCCGGGGGAGAACATCCTTGACGATGCGAAACGTTTTGCCGCCGATTTTTTGACCAAGAAACGTTCTGCCAATCAACTTCTTGATAAATGGATCGTAACGAAGGACTTACCTGGCGAGGTGGGTTATGCATTGGATGTGCCTTGGTATGCAAGCTTGCCTCGCTTGGAGACAAGGTTTTTCATCGAACATTATGGTGGTGAAAAGGACATCTGGATTGGGAAGACACTCTATAgGATGCCTTACGTGAACAATGATGTTTATCTGGAGCTTGCAAAACTGGATTACAACAATTGCCAAGCACTGCATTATTCAGAATGGGAAAAAATTCAAAGGTGGTACTCTGAATCCAGACTGGAAAAGTTTGGATTGAGTAAGGAGAGTCttgtattttgttattttatggcGGCAGCAACCATATTCGAAGCTGAGAGATCTAATGAGAGACTCGCATGGGCTAAAACCGCAGCTTTGACTCAGACTATGACATCCTATTTAGATAATCAACATTCGAGGCTAGTTTTTGTGGATAAATTCCGTAACTACTATTCAAACGGAATGGGGTTGAACCAGAACAATGCAGAGGATAAACTGCTGAGTATTTTGGTTAGAACCATAGATATCCTGGCCCTGGACACTTTTCTAGTTCGCGGTCATGAAATTGCCCATCATCTGCATAAATCTTGGTACAAGTGGCTGTCAAGTTGGAAAATTGGCGAAGAGATTTCCAACGGAGAAGCAGAACTTATATTGGAGACCATAAATTTAACCGGGGGTCATTGGTCGGAAGAGACAGTGGTGAATCCTCAGTACCAAGAATTGCTGGAAGTCACTAACAATGTCTGCCATTTATTGCGCAATTACCAAAGGAACAGAGATTGCGTCTTGAGTTCGATAAGCAACGGTACTACACCAGAGATAGAATCTGAAATGCAACGACTTGTGCAACTGCTGCTCCAAAATTCTTCCAATGGCATTGACTCTAGCATCAAGAATACATTCCTGGCGGTGGCAAAGACTTTTTACTACGCAGCCTTCTTTGATCCAGGAACCATCAAATCTCATGTTGCCCAAGTTCTCTTCAATAGAGTGATGTA 2477 0.4033 MSASVMSIQNLRVWIPPTCSSSSVPPPVFSSPFSVLLACSNNNSSAGLTKRALLVKDRHGDCRFRLTCNVLSRFQIEDNAQVYPDSIPAAFLWHDQETLKEYNIEQESLSQVNFVTNEIRKRIHAAKSMLGSMEDGEISISAYDTAWVALVKHIDGSDRPQFPECLEWIANNQLPDGSWGDSQLFLAHDRIINTLACVVALKTWNIHPEKCEKGMKFFEENLSKLVDENDEHMPIGFEVAFPSLLDIAGSLGIQVPVDSPILKEIFAARDLKLKKIPKDILHKVPTTLLHSLEGMKDLDWKKLLKLQSRDGSFLFSPSSTAFGLMQTKDENALNYLTKIVKRFNGGVPNVYPVDLFEHVWVVDRLQRLGISRYFEQEIKECMNYVSKYWTDKGICWARNSEVQDIDDTAMGFRLLRLHGHQVSSSVFHHFEKNGEFFCFAGQSSQAVTGMFNLYRASQVLLPGENILDDAKRFAADFLTKKRSANQLLDKWIVTKDLPGEVGYALDVPWYASLPRLETRFFIEHYGGEKDIWIGKTLYRMPYVNNDVYLELAKLDYNNCQALHYSEWEKIQRWYSESRLEKFGLSKESLVFCYFMAAATIFEAERSNERLAWAKTAALTQTMTSYLDNQHSRLVFVDKFRNYYSNGMGLNQNNAEDKLLSILVRTIDILALDTFLVRGHEIAHHLHKSWYKWLSSWKIGEEISNGEAELILETINLTGGHWSEETVVNPQYQELLEVTNNVCHLLRNYQRNRDCVLSSISNGTTPEIESEMQRLVQLLLQNSSNGIDSSIKNTFLAVAKTFYYAAFFDPGTIKSHVAQVLFNRVM 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02886 825 Pfam Terpene synthase, N-terminal domain 299 505 IPR001906 GO:0010333|GO:0016829
Bva04g02886 825 SFLD Terpene Cyclase Like 1 N-term 115 539 - -
Bva04g02886 825 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 310 530 IPR008930 -
Bva04g02886 825 Gene3D - 142 354 - -
Bva04g02886 825 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 112 821 - -
Bva04g02886 825 Pfam Terpene synthase family, metal binding domain 549 694 IPR005630 GO:0000287|GO:0010333|GO:0016829
Bva04g02886 825 Gene3D Farnesyl Diphosphate Synthase 559 825 IPR008949 -
Bva04g02886 825 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 142 221 IPR008930 -
Bva04g02886 825 Gene3D - 126 557 IPR036965 GO:0010333|GO:0016829
Bva04g02886 825 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 115 539 - -
Bva04g02886 825 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 112 821 - -
Bva04g02886 825 SUPERFAMILY Terpenoid synthases 544 803 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02886 Bva-Chr4 24590787 24594801 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02886 K04120 - gmx:100807519 1008.82