Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02884 ATGTCTTCTCATTTCTCCACTACTCATCAACATCATCACTATCTCTTGCtccttccctctctctctccttcttATTCTACTAAGCATCTCGTCCATCTTCcgccatcttcttcttcttcttcttctttctcaaatTCCTTTGTGgGTGCTGGCCCGTACCAGGGTAAAGACAAACCAGAAAGCTTTGATTTTCGCCTGAGATGCAGCGCTATATCCAAACCACGAACTCAAGAATGTCAGGAGATGTTCCAGGGTGCTCTGCCAACATTAAATTGGCACGAGATTGTGGAAGATGACACAGACGATGATCATGTGGAGGAAACTGTTAAGGTTTCCTCGACGAATGAGATTGAAAAACGAGTGGATGCCATCAAATCCATGTTAGATTCCATGGAAGATGGAGAAATAAGCATATCTGCTTATGACACAGCATGGGTTGCTCTTATAGAAGATGTTCACGGAAGTGGTGCTCCCCAGTTCCCTTCTAGTCTTGAATGGATTGCTAAGAATCAGCTCCCCGATGGTTCATGGGGAGACAGCCAAGTATTCTCAGCTCATGATCGGATTATTAACGCCTTAGCTTGTGTTGTTGCTTTGAAATCATGGAATATTTATCCTGAAAAATGTGATAAaggaATGGCATTTTTTAGAGAAAACATAAGCAAGCTTGAAAATGAGAACGATGAGCATATGCCAATTGGGTTCGAAGTTGCTTTTCCTTCCCTTCTCGAAATAGCTCGAACTTTGAAGATTGAAGTGCCCGACGAGTCTCCTGTGCTGAAAGATATCTTTGCAAAGAGGAGTGTGAAGCTCACAAgAATTCCAAAGGAGGTGATGCATAAAGTGCCCACAACACTTTTGCATAGCTTAGAAGGAATGTCAGGCCTCGACTGGAAACAGCTTCTAAAACTGCAGTCTCAAGATGGCTCATTCTTGTTCTCTCCCTCTTCCACTGCCTTCGCTCTCATGCAGACCAAAGATCAAAATTGCCTCAAATATCTAAATAAAGCAGTCACCAAGTTCAATGGTGGAGTTCCAAATGTGTATCCTGTGGACTTGTTTGAGCACATTTGGGTGGTTGATCGGCTGCAGCGGCTGGGAATCTCGAGATATTTTGAGCTAGAGATCAAGGAATGCTTGAATTATGTTTATAAGCATTGGACCGAGAAGGGCATTTGCTGGGCAAGAAATTCAGTGGTTCAAGACATCGATGACACTGCGATGGGATTCAGATTACTGAGACTGCATGGCTACCAAGTGTCGGCCAgTGTGTTCAAGCACTTCGAGAGGGAGGGTGAATTCTTCTGCTTTGCCGGGCAGTCAAATCAAGCGGTGACGGGCATGTTTAATCTGCATAGGGCTTCTCAATTAGTATTCCCCGGGGAGAAGATTCTCGAGGATGCCAAACACTTCTCGGCCaaatttttgagaaagaaaCGAGCTGCTAATCAGCTCATAGACAAATGGATCATAATGAAGAACTTGCCCCAAGagGTGGCTTATGCATTGGACGTGCCGTGGTACGCAAACCTACCTCGAGTAGAGACAAGGTTTTATATAGAACAATATGGTGGCGAAGATGATGTTTGGATTGGCAAGACTCTTTATAGGATGCCGTATGtgaacaataatatttatctGGAGCTTGCAAAATTAGATTACGACAATTGCCAAGAAGTGCATCTTAGAGAATGGGACAGAATTCAGCAGTGGTACTCAGAATGTAGATTGGGAGAGTTTGGATTGAGCAGAAGTGATGTTCTGCTTGCATATTTCTTGGCAGCAGCAAGCATATTTGAAGCGGAGAGGTGCCAAGAACGCCTTGCATGGGCCAAAACCACAGCCTTGGTTCACACAATTACATCCTCAATCACCGATCGAGAAATGAGGAAAGCTTTtctaaatagattcaataactgCATTGACGGCCGAGACTACACCTTTGGCTGGTACTGGAGGCTAAATAAGAAGAAGACAGGGCAGGGTCTGCTGGGAGCTTTGGTTGGAACAATAGATCAACTCTCGTGGGATATTCTTGTCTCTCATGGTCATGAAATTGGCTACGATGTGCATCAAGCTTGGAAAAACTGGCTTTCGAGTTGGGCAAGTGGAGGAGACAGGTGGCAAGGAGAAGCAGAGCTTTTGGTGCAAACAATAAACTTAAGCGCAGGGCATTTGCTTTCGGAGGAGCTAGTGTTCAATTCCCAATATCAGCAACTCCTTCGACTCACCAATAGGCTCTGCTCTAGACTCCGTTGTCACCAAAAGGACAAGGCACATGTGAATGGAAGCGGCGATATCAATACGTACAGTATCACCAACTCTGCAGCAGAGTCAGAAATGCAAGAACTTGCGCAATTGGTGCTCCAAAAATCATCAGATGGCATTGACTCCAATATCAAGAACACTCTCCTCACAGTGGCTAAGAGTTTTTACTATGCAGCCTTCTTTGACTCAAGGACCATCAACTTTCATATTGCCAAAGTTCTATTTGAAAAAGTCATTTA 2507 0.424 MSSHFSTTHQHHHYLLLLPSLSPSYSTKHLVHLPPSSSSSSSFSNSFVGAGPYQGKDKPESFDFRLRCSAISKPRTQECQEMFQGALPTLNWHEIVEDDTDDDHVEETVKVSSTNEIEKRVDAIKSMLDSMEDGEISISAYDTAWVALIEDVHGSGAPQFPSSLEWIAKNQLPDGSWGDSQVFSAHDRIINALACVVALKSWNIYPEKCDKGMAFFRENISKLENENDEHMPIGFEVAFPSLLEIARTLKIEVPDESPVLKDIFAKRSVKLTRIPKEVMHKVPTTLLHSLEGMSGLDWKQLLKLQSQDGSFLFSPSSTAFALMQTKDQNCLKYLNKAVTKFNGGVPNVYPVDLFEHIWVVDRLQRLGISRYFELEIKECLNYVYKHWTEKGICWARNSVVQDIDDTAMGFRLLRLHGYQVSASVFKHFEREGEFFCFAGQSNQAVTGMFNLHRASQLVFPGEKILEDAKHFSAKFLRKKRAANQLIDKWIIMKNLPQEVAYALDVPWYANLPRVETRFYIEQYGGEDDVWIGKTLYRMPYVNNNIYLELAKLDYDNCQEVHLREWDRIQQWYSECRLGEFGLSRSDVLLAYFLAAASIFEAERCQERLAWAKTTALVHTITSSITDREMRKAFLNRFNNCIDGRDYTFGWRLNKKKTGQGLLGALVGTIDQLSWDILVSHGHEIGYDVHQAWKNWLSSWASGGDRWQGEAELLVQTINLSAGHLLSEELVFNSQYQQLLRLTNRLCSRLRCHQKDKAHVNGSGDINTYSITNSAAESEMQELAQLVLQKSSDGIDSNIKNTLLTVAKSFYYAAFFDSRTINFHIAKVLFEKVI 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02884 833 Gene3D Farnesyl Diphosphate Synthase 557 833 IPR008949 -
Bva04g02884 833 SFLD Terpene Cyclase Like 1 N-term 110 537 - -
Bva04g02884 833 SUPERFAMILY Terpenoid synthases 542 810 IPR008949 -
Bva04g02884 833 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 117 218 IPR008930 -
Bva04g02884 833 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 308 528 IPR008930 -
Bva04g02884 833 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 102 830 - -
Bva04g02884 833 Pfam Terpene synthase family, metal binding domain 547 700 IPR005630 GO:0000287|GO:0010333|GO:0016829
Bva04g02884 833 Pfam Terpene synthase, N-terminal domain 297 503 IPR001906 GO:0010333|GO:0016829
Bva04g02884 833 Gene3D - 140 352 - -
Bva04g02884 833 Gene3D - 123 554 IPR036965 GO:0010333|GO:0016829
Bva04g02884 833 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 102 830 - -
Bva04g02884 833 CDD Terpene_cyclase_plant_C1 348 830 IPR044814 GO:0010333|GO:0016102
Bva04g02884 833 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 110 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02884 Bva-Chr4 24579378 24585324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02884 K04120 - gmx:100784193 1196.03