Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02880 ATGGATACCCTCCTCCACACCCCGTCATCAATGGCCAAGCGACCTTGTCCTTCTCAAAACCCTAGAATCCTAAACCTCAACCATGTGGACCATGTACTCCAAACATTCCTGGGGCTCTCAGAATTCCCTTCTGTATCCATTGATCTCTCCCTGGAAAGGCTTCTTGAATCAATGCCCACGGATTCCGATCAGACTCTATTCATTGATCGCGCCCTTAAGATGGGCTCCATGCTTCTTGATGCTGCCAAACACTCTTCCAGAAAGCGGGCCTCCAAGCACAATTCTCTCGCCTGGCCTCTCCCTCCAGACCTTACCGTTAAAGTCTTTTCAATGCTTGATACTCAGAGTCTATGCTATGCAGCGGCTACTTGTTCATTGTTTAACAAATGTGCTAAGGATCCTGTGTGTTATGAAAATCTTGATTTGACAACACTGGTGCCAAAAGTTAACAATGCAGTAGTTTCCACTATGATTCATCGTGCCGGAAAGGCCCTACGGTCTCTTAAGCTTGGTGTTGTGCCTGGTGCTACTGCTTCATCTGGGTCTTGTCAGTCAATGGTCTATACGATCAGAAACTCTATTGTAGATGTATCTAAGTTATCATGGAATGATAAGAGATCTCGACAAGGGAGAGAGTCATCCGTACTGACAAGAGCCTGTTTAAACCCTTTAGGTGGAGAGGGTGGTGCTCCAGGgACTCTTTTGAGGAAGTTGCACTTATACAATATTGAAAGAATGGATATGACATCCCTTTGTGCAGCACTATCATCCTGTCCTTCTCTCCTTGATCTGGAAATTGTTGGGCTTCATGTTGAATTGAGGCAAACATTATTGTCAGTGAGCACAAACTGTCACTTGATCGAGCGTTTGTTTTTTGAGTCATCAAAAACAGGCAGAGATGACAGTTTGAAGATACCTACCTGCAAAGATCTAGTAAACAATTGTCCTCATTTAACTTCTTTGTCGTTGAGAGGGTTCAAGCTGCATGATTGCAAAGTTCGCATACTGGTTAAGGGTTTTCGGAAACTAAAATATGTTGATTTTTCAACATCTTATTCAATCAGCGGAGGTTTCTTAAGAAACCTTGGAGGCAGCAATGGTGGAAATTTGCTCGAGGTCTTAATTTTAAGGGACTGCATGCATCTGAAAGAGATGGAAGTTGCTAGGCTCTTAACAGCAATTCTTACCGGCGATTTCAAATTCCTTGTCCATCTTGATATATCCAATAGGGAAGGCTTAGCATCTGAAGGTGACTGGTACCATAGGTGCTATAACCCTGGTATCCTGCCGTTAAAGCAGATTTTGGAAGCAAGACCCAGTATGTGCTTACTTGCTGAATACCCGTCCGAAGGCAGTTACATCGAGACGTTTGATGCTGAGATCAACAGTGATATAAGTCTGCCATCACAATTAAGCAGCCATACTTCAGATGGATCGATTTTTATGAGTACTTCTGAAAGCAGTTATAATAGTGATCAGGGTAGTGGCAATGAGGATGGTCAAGATGCCAATTATGTGATTTACGAGGAAAGCTCAGATGAAATAGACTTTTTGGCTCTCTA 1562 0.4315 MDTLLHTPSSMAKRPCPSQNPRILNLNHVDHVLQTFLGLSEFPSVSIDLSLERLLESMPTDSDQTLFIDRALKMGSMLLDAAKHSSRKRASKHNSLAWPLPPDLTVKVFSMLDTQSLCYAAATCSLFNKCAKDPVCYENLDLTTLVPKVNNAVVSTMIHRAGKALRSLKLGVVPGATASSGSCQSMVYTIRNSIVDVSKLSWNDKRSRQGRESSVLTRACLNPLGGEGGAPGTLLRKLHLYNIERMDMTSLCAALSSCPSLLDLEIVGLHVELRQTLLSVSTNCHLIERLFFESSKTGRDDSLKIPTCKDLVNNCPHLTSLSLRGFKLHDCKVRILVKGFRKLKYVDFSTSYSISGGFLRNLGGSNGGNLLEVLILRDCMHLKEMEVARLLTAILTGDFKFLVHLDISNREGLASEGDWYHRCYNPGILPLKQILEARPSMCLLAEYPSEGSYIETFDAEINSDISLPSQLSSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLAL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02880 520 Gene3D Ribonuclease Inhibitor 94 391 IPR032675 -
Bva04g02880 520 SUPERFAMILY RNI-like 233 410 - -
Bva04g02880 520 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 28 460 - -
Bva04g02880 520 MobiDBLite consensus disorder prediction 482 501 - -
Bva04g02880 520 PANTHER F-BOX SKIP17-LIKE PROTEIN 28 460 - -
Bva04g02880 520 Pfam F-box-like 100 142 IPR001810 GO:0005515
Bva04g02880 520 MobiDBLite consensus disorder prediction 482 500 - -
Bva04g02880 520 SUPERFAMILY F-box domain 98 145 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02880 Bva-Chr4 24564765 24569904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02880 K10268 - gmx:100786317 839.721