Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02866 ATGGTAGCTATTATGTCTCCACTGATAGAAGGTCTTCCCGACGCTGTGGCAATTAGGTGTCTTGCAAGGGTTCCTTTCTACCTGCACCCAAAATTAGAGCTCGTCTGTCATTCTTGGCAAGCAGCCATTCGTAGTCCTGAACTATTTAAAGCTCGACAGGAAGTTGGTTCGTCTGAGGATCTGTTATGTGTCTGTGCTTTTGACCCAGAGAATTTGTGGCAACTGTATGACCCTCTGCGAGATCTCTGGATTACGCTCCCTGTTCTTCCCTCCAAAATCAGGCACCTTTCCCACTTTGGTGCTGTCTCTGCTGCTGGAAAACTGTTTGTGATTGGTGGCGGCAGTGATGCAGTTGATCCATCGACAGGTGACCAAGATGGCAGTTTTGCAACAAATGAAGTCTGGTCATACGATCCTGTAACCCGACAGTGGGCTCCACGTGCATCAATGCTTGTCCCTCGTGCGATGTTTGCATGTTGTGTTTTGAATGGAAAGATTATTGTGGCAGGTGGTTTCACGAACTTGAGAAAATCAATATCTCAAGCTGAAATGTATGACCCAGAGAAAGATATCTGGATTCCAATGTCTGATCTTCACCGCTCCCATAATACGGCCTGTTCAGGGTTAGTGATCCGAGGAAAGGTGCATGTCTTGCACAAGGGGTTGTCAACAGTGCAAGTATTAGACAAGAATGCGGATCCTGGTTGGACTGTTGAAGAATGTGGTTGGCTCCAAGGTCCAATGGCAGTTGTTAGGGATGCTCTTTTTGTGATGAGCCATGGACTTATCATGAAGCAAGACAAAGAAGTCAGAAAGGTTATAGTTTCGGCATCTGAGTTTCGAAAGAGAATTGGTTATGCGATGATTGGGCTTGGTGATGAGTTGTTTGTCATTGGAGGCGTAATAGGCCCTGACAGGTTCAACTGGGAGATTAAGCCGTTGTCCGATGTTGATATTCTCACACTTGGGGGTGAGAGACCAACTTGGCGCCAGGCAGCTCCAATGACACGGTGTCGTGGCACTATCCTTGGTTGTACACTTCTAAGAATTTa 1052 0.4667 MVAIMSPLIEGLPDAVAIRCLARVPFYLHPKLELVCHSWQAAIRSPELFKARQEVGSSEDLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSAAGKLFVIGGGSDAVDPSTGDQDGSFATNEVWSYDPVTRQWAPRASMLVPRAMFACCVLNGKIIVAGGFTNLRKSISQAEMYDPEKDIWIPMSDLHRSHNTACSGLVIRGKVHVLHKGLSTVQVLDKNADPGWTVEECGWLQGPMAVVRDALFVMSHGLIMKQDKEVRKVIVSASEFRKRIGYAMIGLGDELFVIGGVIGPDRFNWEIKPLSDVDILTLGGERPTWRQAAPMTRCRGTILGCTLLRI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02866 350 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 6 350 - -
Bva04g02866 350 SUPERFAMILY Kelch motif 65 339 IPR015915 GO:0005515
Bva04g02866 350 Gene3D - 63 347 IPR015915 GO:0005515
Bva04g02866 350 SMART kelc_smart 107 164 IPR006652 GO:0005515
Bva04g02866 350 SMART kelc_smart 165 213 IPR006652 GO:0005515
Bva04g02866 350 SMART kelc_smart 294 349 IPR006652 GO:0005515
Bva04g02866 350 Pfam Kelch motif 153 198 IPR006652 GO:0005515
Bva04g02866 350 Pfam Kelch motif 96 150 IPR006652 GO:0005515
Bva04g02866 350 SUPERFAMILY F-box domain 7 51 IPR036047 GO:0005515
Bva04g02866 350 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 6 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02866 Bva-Chr4 24518208 24521935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02866 12 192 Miscellaneous Gene Families AT4G33900 30.526 1.47e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02866 - - gmx:100800954 620.157