Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02857 ATGGCGGCTGCGTCCCACGCAGATTCTAAAGGAATGTATTCATGGTGGTGGAACAGCCACATAAGTCCTAAGAACTCAAAATGGCTCCAAGAAAATCTGACTGATATGGATTTCAAGGTGAAGCAAATGATTAAGCTCATCGAAGAAGATGCAGATTCCTTTGCAAGGAGGGCAGAAATGTATTATAAAAAACGCCCGGAACTTATGAAAATGGTTGAAGAGTTTTACAGGGCATACCGTGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATCCGTCAGGCACATCGGACCATGGCTGAGGCTTTTCCTAACCAAGTTCCTCTGATATTGGCAGATGATTTGCCTGCAGTTTCTAATGCAGACTCTGAGCCACGTTCTCCTGGTATCCCTCATTCTTCACGTGCTTTTCTTGAACCAGATGAGTTGCAAAAGGATGCTTCTGGGCTCTCTCCATCTCATTTTCATGTTATCAGAAGAAATGGAGCTTTCACCGAAGAACCTGATTCTGCTATAAGCAGAAGGGGATTAAAACAGCTCAATGATATCTTGCCAGGAGAACATGGAAAGTTTACAGAAGGGCGTGCGAGAAAGGGCCTCAATTTTGGCAACACGGAAGAGAGAAATAGGCAAAAAGATGGGAGCCGTGATCCTGGGGTTCAGGCATTGTCCGAGTCTGATCAGGTGACTAAAGCTGAGACAGAAATTTTGGCATTAAAGAGGGCCCTTGCAAAATTAGAAGCTGAAAAGGAAGATGGCTTGCTTCAGTATCAGAAGAGTTTGGAGAGATTGTCTAACCTGGAGTCAGAATTATCTCATGCACAAGAGAATTCATTGGGACTTGGTGAACGTGCAAGCAAAGCTGAATCTGAAGTTCAAACCTTGAAGGAAGCACTCGCCAAACTACAGGCTGAAAGGGACTCTAGTCTTCTTCAGTACCAGCAGTGTTTGGAGAAAATATCTGATCTGGAGAGAAacgttttctcttttcaaaagGATGCAGGAGATCTTAATGAGCGAGCTATTAGATCTGAAACTGAGGCTGAATCCCTAAAGCGGGATCTAGCTAGAGTAGaagcagaaaaggaaaatgctcTTGTTCAATATAAGCAGTGTTTGGAGACCTTATCGAAACTGGAGGAGAGGTTAGGCAAAGCTGAGGAGGAAGCCAGAAGGATAACCGAACAAGCTAGTAAGgctgaaaatgaaattgtggCCATGAAGTTAGAAATTGATAAACtaacaaaagagaaggaagatgCTGCACTCCGTTATCAACAGTGCTTGGAGATAATTTCCAGTTTGGAACATAAGCTCTATTGTGCCCAGGAGGAGGTGCAGAGCCTAAATTATAAGAGAGATGATGGGGTTGAAAAGTTGAAGAATTCTGAACAGAAATGTCTTCTACTGGAAACATCTAATCAGACTCTGCAGTCTGAATTTGAATCTTTGGCACAGAAGATTGGatctcaaaatgaagaacttAATGAGAAGCAAAAGGAATTGGGCAGGCTTTGGACTTGCATACAAGAGGAGCGGTCGCGATTCTTGGAGGCTGAAACTGCTTTCCAAACTCTTCAGAATTTGCATTCTCAATCTCAGGAAGAGCTTAGGTCTCTTGCTGCTGAACTTCATAATAAGGCTGATATTCTGGAGAGTGTGGAATCTCATAAGCAGGCTTTAGAAGATGAAGTACAGAAGGTTAAggaggaaaacaaaattttgaatgagtttAAACTTTCTTCATCTTCGTCAATTACCAATTTGCAGGAGGAGATATTTAATCTGAAACAGACAATAGAGAAACTTGAACAAGAGGTTGGACAGCGAGTTGATGAAAGAAATGCGCTTCAGcaagaaatttattgtcttaaaCAGGAGCTCAACAATGTGAATATTAGTCATGATGCTATGACGGAAGAGGTTCGGTCAACTGGCTTGGATCCAGAGAGCTTTGGATCATCTGTGAAGGAATTGCAGGATGAGAACTCAAAGCTAAAAGAGACATGTGAAGCTAACAGAAGTGAGAAAGCAACTCTTTTGGAAAAACTGGAGATCATGGAGAGACTTTTGGAGAAAAATGCTATTTTGGAGAATTCCCTATCAGACTTAAATGCTGAGTTGGAAAGTGTCAGAGAAAAGGTACAGTTGCTAGAAGAAACATGCCAATCTCTGCTTGAGGAGAAATCCGCTCTTGCTGCTGAGAAGGCCACCTTGTTTCCTCAGTTAGAAACTACAACTGAGAAGCTGGAGGAGCTTTCAGGGAAGAACAACCTTTTGGAGAATTCACTATTTGATGCGAATGCTGAACTCGAAGGATTAAGGGTAAAGTCAAAGAGATTAGAAGATTCATGCCTGTTGCTTGACCAGGACAAGTCAAATCTGATCTCACAGAAAGAAACTGTGATTTCACAGTTGAACATCACTCATCAAACTGTGAAAAATCTTGAGAAACAATACAGTGAATTGGAGCAAAAGCATTTGGagataaaaggagaaaaggaatCTGCTCTTCAAAAGGTAGAAGAGCTATTAGTTTCCTTATATGCTGAGAGGGAAGAGCACTCCAGAATTGTGCAATTGAGTGAAAGCCAGTTGGCTGATAAGGCATTGCAAATTCACATTCTACAAGGAGATGCAGATTCCATGAGAATGGAATATGAGGAGGAACAGGACAGATCTGTACGCTCTCAAATTGAACTTTTCATCTTGCAGAAATGTATCCAGGATCTGATGGAGAAGAACTTCTCCCTTCTGGTTGAATCTCAGAGACTTTTGGAGGCATCCAAGATGTCAGAAAGACTTGTATCTAAATTGGAGAATGAGAACCTTCAGAAGCAGGTTGACATCAATTCTTTGTCTGAGGAACTTAGAATACTAAGGATTGGGCTGCTTCAGGTGTTGAAGACTCTTGACATTGATAGCGAGCATTTGTGTGAAGATATGATTGATCAAGACCAGATGCTTGTGAACTACATTCATGGGAAACTTCAGGAGACACAGAACTATAATGGTACAATTTTCATTGAAAGCCAGCACTTGGCCATTGAGAATTCAGTTCTTTCTGCATTCCTTGGGCAGCTAAAACTAAAAGTAGAAAAGCTTGTGACTGAAAGAGACACCCTTGATGAGCGGTTGAGGTTCCAGTTAGATCAATTCTCGGCATTGCAAGCTGAGGTTCAGGAGATATTGGAGAAGAATCGGGAATTGAAGTTGACAGTAAACAAGGGAGAACAGAGAATGGTAGTAATGGAAACTGAAAAGGAGAATCTATGTAAGCAGCTGTTAGACTTGGAGGAGGCTCACAAAAGTTTACAGGAAGAATGTTGCAAGACGTCTGAAGAGAAAAAATCCTTGATGAGAAGATTTCTAGATCTGGATgaagagaaaagtaaattGGAAGAAGAAATCTGTGTCATGATTCAGAACACAATAGCTCAATCTAATATCTCTTTGATCTACCAGAACATCGTCTTCGAAAAACTTCTGGCACTGAAAGATCTAAGTCAAGATCTTGATAAACTTTTTTCCTCAAATAATGACCTTGAGGTGAAGTTAGAAATTGTGGTGGGCAAATTAGAAGATTTACAAATGGAAAATACACTTCTTAAGGAGGCGTTAGTGATGTCAACTGTTGAACTGAAATTAGTTGAATCAGTCAATGATGAGTTAAATTGCCAGATTAGAACGGTAAAAGAATTGTTGTCTCGAAAGGAAAATGAACTTTCAGAAGCAGCAGAGATGTTTAGTGCTTTGATCAAAGAGAAAACAGAATTGCAAAGAATGGTGGAAGATCTGAGGAGTGAGTGTGATGAGTTCAGGGTGGTACATGAAGACCAAgctaatcaaattttaaaattatcctcAGAAAAGGATAGTCAGAATGAAGAGCTTGGATGCCTTTGTGAAGTGAATCGGAAGTTGGAGTCTGAAATGAGGCAACTTTCTAAAGAACTTGAAGAAACAAAACGAAGGGAAGAAAAGTTAAGTTATCAGTTATATGAAGGGACAAATGAGGTTGAATTCTGGGAAACTCAGGCTGCTGCTCTCTTTTCTGAACTGCAGAATTCTTTTGTCAATGAAACATTATTTGAAGGGAAGGTTCATGAGCTAGCTGATGCATGCGAGAGTCTTGAGTGTGGAAGCCACTTAAAAGGTATCGAAAGTGAACAgctgaaagaaagaataaggaagttggaagatgaaaatggaaCACTCCGTGGTCAGCTGGCTGCATATTTCCCAGCTGTCAGCACCTTGAAGGACTCTATCGCATCTCTGGAGATGCAGACTCTTGTACATGTAAAGTCTGATGACTATCACCAAGCAAAGGTTGTGGCTCCAGATGGACTTGCGGACTTCCCAGACATGCAGAATAGGATCAACGCAATTGAAATGGCTGTTAAACAGATGAAAGAACAATTGAAACCGAAGGTTAGAGAGATTCAAGAGTTAAAATCCGGAATTAGCTGGAATCAAGAAGATAAAGCAAGCAAGCCTGTTCCTCTAATGGATGAAGGAAAGGAACACGCTGATTCACAGGGGGGGAAATCAATGCCAGATATCCCTGTAGAGAATGAGGTTCTGACAAAAGACATCATGCTTGATCAAATGTCTGAATGTCCATCATATGGGATAAGTGGAAGAGAAATTCTCAAGGCTGATGATCAGATGCTTGAGATATGGGAAACTGCTGATAAGGATGGCAATGTTGGCGTCACGGTTGGCAAGGCACAGAAGGTGGCCGCTGGAAAAAATAAGCATCTCTCAGCAGAGTCGTTATCTGAAAAGGAGTTGAGTGTGGACAAACTAGAGATCTCAGAGAGATTGACACAGCAACGTGAAGAAGGGAACAAGGGAAAGATTTTAGAAGAACTCAATTCTGATGCACAAAAGTTGGCAAACCTTCAAATCGCCGTACAAGATTTGACGAAGAAGGTGGAAATTAATGAGACGAGCACAAAGGGAAAAGATTTTGAGTATGGTACACTGAAAGGCCAGATTAAAGCTACTGAGGAGGCCATCATGAATTTGTTTGAGGCTAACCACAAGTTGATGAAGAGTGTAGAAGAGGGTAACTCGTCCTTTGATGGGAAGCCTACAACCGAGTCAGATGAGAGTGGAAGCATCAGCAGGAGTAGAGTTTCAGAACAGGCACGGAGAGGATCAGAAAAGATAGGACGGCTGCAGTTAGAGGTGCAAAGACTGcaatttattcttcttaaacttgaagatgaaaaagaaagcaaaggaaaaacaaaaattgctaATCGAAGTCCAAGAGTCCTTCTGCGAGATTACCTCTACGGTGGTACGAGAaccaatcaaaaaaagaagaaagcacaCTTCTGTGCGTGCGTAAGACCTTCAACTAGAGGAGATTG 5387 0.3937 MAAASHADSKGMYSWWWNSHISPKNSKWLQENLTDMDFKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPLILADDLPAVSNADSEPRSPGIPHSSRAFLEPDELQKDASGLSPSHFHVIRRNGAFTEEPDSAISRRGLKQLNDILPGEHGKFTEGRARKGLNFGNTEERNRQKDGSRDPGVQALSESDQVTKAETEILALKRALAKLEAEKEDGLLQYQKSLERLSNLESELSHAQENSLGLGERASKAESEVQTLKEALAKLQAERDSSLLQYQQCLEKISDLERNVFSFQKDAGDLNERAIRSETEAESLKRDLARVEAEKENALVQYKQCLETLSKLEERLGKAEEEARRITEQASKAENEIVAMKLEIDKLTKEKEDAALRYQQCLEIISSLEHKLYCAQEEVQSLNYKRDDGVEKLKNSEQKCLLLETSNQTLQSEFESLAQKIGSQNEELNEKQKELGRLWTCIQEERSRFLEAETAFQTLQNLHSQSQEELRSLAAELHNKADILESVESHKQALEDEVQKVKEENKILNEFKLSSSSSITNLQEEIFNLKQTIEKLEQEVGQRVDERNALQQEIYCLKQELNNVNISHDAMTEEVRSTGLDPESFGSSVKELQDENSKLKETCEANRSEKATLLEKLEIMERLLEKNAILENSLSDLNAELESVREKVQLLEETCQSLLEEKSALAAEKATLFPQLETTTEKLEELSGKNNLLENSLFDANAELEGLRVKSKRLEDSCLLLDQDKSNLISQKETVISQLNITHQTVKNLEKQYSELEQKHLEIKGEKESALQKVEELLVSLYAEREEHSRIVQLSESQLADKALQIHILQGDADSMRMEYEEEQDRSVRSQIELFILQKCIQDLMEKNFSLLVESQRLLEASKMSERLVSKLENENLQKQVDINSLSEELRILRIGLLQVLKTLDIDSEHLCEDMIDQDQMLVNYIHGKLQETQNYNGTIFIESQHLAIENSVLSAFLGQLKLKVEKLVTERDTLDERLRFQLDQFSALQAEVQEILEKNRELKLTVNKGEQRMVVMETEKENLCKQLLDLEEAHKSLQEECCKTSEEKKSLMRRFLDLDEEKSKLEEEICVMIQNTIAQSNISLIYQNIVFEKLLALKDLSQDLDKLFSSNNDLEVKLEIVVGKLEDLQMENTLLKEALVMSTVELKLVESVNDELNCQIRTVKELLSRKENELSEAAEMFSALIKEKTELQRMVEDLRSECDEFRVVHEDQANQILKLSSEKDSQNEELGCLCEVNRKLESEMRQLSKELEETKRREEKLSYQLYEGTNEVEFWETQAAALFSELQNSFVNETLFEGKVHELADACESLECGSHLKGIESEQLKERIRKLEDENGTLRGQLAAYFPAVSTLKDSIASLEMQTLVHVKSDDYHQAKVVAPDGLADFPDMQNRINAIEMAVKQMKEQLKPKVREIQELKSGISWNQEDKASKPVPLMDEGKEHADSQGGKSMPDIPVENEVLTKDIMLDQMSECPSYGISGREILKADDQMLEIWETADKDGNVGVTVGKAQKVAAGKNKHLSAESLSEKELSVDKLEISERLTQQREEGNKGKILEELNSDAQKLANLQIAVQDLTKKVEINETSTKGKDFEYGTLKGQIKATEEAIMNLFEANHKLMKSVEEGNSSFDGKPTTESDESGSISRSRVSEQARRGSEKIGRLQLEVQRLQFILLKLEDEKESKGKTKIANRSPRVLLRDYLYGGTRTNQKKKKAHFCACVRPSTRGD 1795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02857 1795 MobiDBLite consensus disorder prediction 1500 1516 - -
Bva04g02857 1795 Coils Coil 286 313 - -
Bva04g02857 1795 Coils Coil 524 544 - -
Bva04g02857 1795 Coils Coil 657 677 - -
Bva04g02857 1795 Coils Coil 807 841 - -
Bva04g02857 1795 Coils Coil 744 771 - -
Bva04g02857 1795 Coils Coil 552 579 - -
Bva04g02857 1795 Coils Coil 1727 1747 - -
Bva04g02857 1795 Coils Coil 335 425 - -
Bva04g02857 1795 Gene3D - 523 697 - -
Bva04g02857 1795 SUPERFAMILY Tropomyosin 401 641 - -
Bva04g02857 1795 PANTHER PROTEIN NETWORKED 4A 1 1795 - -
Bva04g02857 1795 Coils Coil 1117 1137 - -
Bva04g02857 1795 Coils Coil 688 736 - -
Bva04g02857 1795 Coils Coil 1390 1410 - -
Bva04g02857 1795 Coils Coil 1166 1200 - -
Bva04g02857 1795 Coils Coil 461 502 - -
Bva04g02857 1795 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Bva04g02857 1795 MobiDBLite consensus disorder prediction 1695 1717 - -
Bva04g02857 1795 MobiDBLite consensus disorder prediction 1691 1725 - -
Bva04g02857 1795 Coils Coil 1627 1647 - -
Bva04g02857 1795 Coils Coil 587 621 - -
Bva04g02857 1795 Coils Coil 1026 1046 - -
Bva04g02857 1795 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1795 - -
Bva04g02857 1795 MobiDBLite consensus disorder prediction 189 216 - -
Bva04g02857 1795 Coils Coil 1222 1333 - -
Bva04g02857 1795 Coils Coil 1054 1109 - -
Bva04g02857 1795 MobiDBLite consensus disorder prediction 185 229 - -
Bva04g02857 1795 Coils Coil 937 957 - -
Bva04g02857 1795 MobiDBLite consensus disorder prediction 1494 1523 - -
Bva04g02857 1795 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Bva04g02857 1795 Coils Coil 230 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02857 Bva-Chr4 24464866 24472392 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02857 - - gmx:100810726 2292.69