Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02852 ATGGAACCCAAGTTTACCATCAATTCTCGCCGGCCAGAATTCCTTCCAACCGGCGGCGGCACCCATCTGCCGGAGAGCCCAAGAGTTCCAATGGAGTTTCTGTCGAGGTCATGGAGTGCCTCTGCTTTCGAAGTCTCCAAAGCTCTGGCACCTCAACctcctcttccttcttctaGTATCACCTCCAAGACTTGTAATGGGTCATCTTCTATACCCGAAGATACAACTGGAGAGTCCGAGGAGCTCTCAGCTCTCTCCAGGAATCAGTTTTCTTTCGCTTCCTCTGCTACTTCACAGCTTGTCCTCGAGCGCATTATGTCACAGTCCGCAAGAGAGGAAGTTTCACCGTTAACGTCGGGTAGATTATCTCACAGTAGCGAACCTTTGAACGGCGGTGGTTCGTTAACCGGAACAGAGAGTCCACCGATATCTCCTTCTGAAGAATTTGACGACGTCGTTAAGTTTTTCCGGTCGAACAATTCCATACATTCTTTATTCAATGGTGGAAGAGCCAGTGCTGCTATAGTCAATGGCGCGCCTAGCTCTGGACACAAGACAGTTGGGAGATGGTTGAAAgacagaagagaaaagaagaaagaagaaaacagaacCCATAATGCGCAGCTGCATGCTGCTGTTTCAGTGGCTGCAGTGGCCGCTGCTGTGGCAGCAATTACCGCAGCAACAGCAGCTTCATCTGCTCCCGGCAAGGGTCAGAGAATGGCCAAAACTGATATGGCAATGGCATCTGCAGCCACATTAGTTGCGGCGCAGTGTGTAGAAGCTGCCGAAGCAATGGGAGCTGAGCGAGACCACCTTGCTTCTGTGGTTAGCTCTGCAGTCAATGTCCGCTCGCATGATGATATCACTACTCTTACTGCAGCGGCTGCCACAGGTCCTTCGTATGCAGCTCTACGTGGGGCAGCAACCTTGAAAGCAAGAGCACTGAAAGAGGTGAGGAATATTGCTACGGTGACACCAGTTGAGAGAAGCATGGGGATTGGAAAATGCACTAAAGGTAATAACAGCAGTACCAGCACCAGTGATAGCGGAGAGATTATCAATGGACAAAACTTTCTGGGCATCTGCAGCCAAGAGCTCATAGCTAAGGGCGGTGAACTGCTTAAACGCACCCGTAAAGGTGATCTTCACTGGAAAATAGTTTCTGTTTATCTGCATCGAACAGGGCAGGTGATGCTAAAAATGAAGAGCAGGCATGTTGCAGGAAcatttaccaaaaagaaaaagcATATAGTATTTGATATCTGCATGGATTTGCCAGCATGGCCGGGGAGACATCTATTTGATGGGGGAGAACAGAGACGATACTTTGGATTGAAGACAGATAATAGGGGAATTGTGGAGTTCGAGTGCAGGAATCAAAGGGAATATGATATCTGGACTCAAGGCGTTTCTAGGCTTCTATCCATTGTTGCagaaagacaaaacaaaaatccgTTCTG 1463 0.4607 MEPKFTINSRRPEFLPTGGGTHLPESPRVPMEFLSRSWSASAFEVSKALAPQPPLPSSSITSKTCNGSSSIPEDTTGESEELSALSRNQFSFASSATSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTESPPISPSEEFDDVVKFFRSNNSIHSLFNGGRASAAIVNGAPSSGHKTVGRWLKDRREKKKEENRTHNAQLHAAVSVAAVAAAVAAITAATAASSAPGKGQRMAKTDMAMASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVRNIATVTPVERSMGIGKCTKGNNSSTSTSDSGEIINGQNFLGICSQELIAKGGELLKRTRKGDLHWKIVSVYLHRTGQVMLKMKSRHVAGTFTKKKKHIVFDICMDLPAWPGRHLFDGGEQRRYFGLKTDNRGIVEFECRNQREYDIWTQGVSRLLSIVAERQNKNPF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02852 482 PANTHER AUXIN CANALIZATION PROTEIN 1 480 - -
Bva04g02852 482 MobiDBLite consensus disorder prediction 52 83 - -
Bva04g02852 482 PANTHER EXPRESSED PROTEIN 1 480 IPR040269 -
Bva04g02852 482 Pfam Plant pleckstrin homology-like region 368 473 IPR013666 -
Bva04g02852 482 MobiDBLite consensus disorder prediction 112 143 - -
Bva04g02852 482 Pfam Auxin canalisation 24 325 IPR008546 -
Bva04g02852 482 MobiDBLite consensus disorder prediction 1 27 - -
Bva04g02852 482 MobiDBLite consensus disorder prediction 112 146 - -
Bva04g02852 482 MobiDBLite consensus disorder prediction 45 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02852 Bva-Chr4 24432656 24436574 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02852 - - aip:107645207 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02852 04 24432656 24436574 Bva13g02802 13 20427213 20432600 BWGD