Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02840 ATGCCGTTCTCAATGAAAATCCAGCCTATCGATTCTCGTATAGATGAACAGGCGACCAGGTCTGAGCTGGTCAAGCCGGTAGTAAAGTCGCGATTTAAGAGGCTCTTTGAGCGTCAATTCCCTGGTGTTCTGAGAAATCCGGCGGCAGAGAAGATCGGCGTCGAGGAGCCATTTTTTGGCAAGGACGGCGTTAACAGCACCAATGATTTGGAGCCGAGTTCAGTGTGTTTGGCGAAAATGGTGCAAAATTTTATCGAGGAGAATCACGAGAAGCACTCCGCTTCCATTAAGTGTGGACGTAACCGCTGCAACTGCTTCAATGGAAATTGTGATGATATATCTGACGACGAATCAGACGCGTTTGGTGGTTTTGGTGACTCCAACTATTCGTCGACCGGTGAAGTTCTTAAGGGTTTGGTGGCTTGTGCGAGCATTAGCGAAAGGAATTTGCTAGCGGACACCGCTAAGatcattgagaaaaataagatcTTTAAGCATAAAGACGACTATTGTCGAAAGATTGTCACTGACGGATTGTTAATTCTCGGTTACGATGCGTCAATTTGCAAATCTCGCTGGGAAAAATCCCCCTTTTATCCCGCCGGGGAATATGAGTACATAGACGTGATGATCGCAAGCGACCGAGTGCTAATTGACATCGATTTCAGCTCAGAGTTTGAAATTGCTCGGTCAACAAAAGCTTACAAGACGATCCTTCAGACCCTTCCCCACATATTCGTGGGCAAGAGCGATCGTTTGCAGAGTATCATAGCCATCGTCTCAGAGGCAGCGAAACAGAGTCTGAAGAAGAAGGGTATGCACATTCCGCCCTGGAGGAAAACTGAATACGTGAAAGCAAAATGGCTCTCTTCTTACACGCGAACCACACCCACAACTCATAGCTCGCACGAAACAATGGAAAAAGCTGAAAGCTCTCGACAACCTTTGATGGAGAGTGGTCAATTTGAACTGAGTCACGGAGAGGGAAACCATGCTGGCGAGGAATTGGACGAGGTTGTGTTTACTTTATCTCAGCGTTCTGTGGAGCATGAGAAGGCAGACGAGGTGACAGAATGGAAGCCGCCGGAGCTGAAACCCAAGAACTCACTGTCGGGGTCGGGGGTTAAGGTTGTCACTGGTTTGGCAGCGGTCTTCGATAACCcata 1166 0.4726 MPFSMKIQPIDSRIDEQATRSELVKPVVKSRFKRLFERQFPGVLRNPAAEKIGVEEPFFGKDGVNSTNDLEPSSVCLAKMVQNFIEENHEKHSASIKCGRNRCNCFNGNCDDISDDESDAFGGFGDSNYSSTGEVLKGLVACASISERNLLADTAKIIEKNKIFKHKDDYCRKIVTDGLLILGYDASICKSRWEKSPFYPAGEYEYIDVMIASDRVLIDIDFSSEFEIARSTKAYKTILQTLPHIFVGKSDRLQSIIAIVSEAAKQSLKKKGMHIPPWRKTEYVKAKWLSSYTRTTPTTHSSHETMEKAESSRQPLMESGQFELSHGEGNHAGEELDEVVFTLSQRSVEHEKADEVTEWKPPELKPKNSLSGSGVKVVTGLAAVFDNP 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02840 388 Pfam PDDEXK-like family of unknown function 79 294 IPR006502 -
Bva04g02840 388 MobiDBLite consensus disorder prediction 351 373 - -
Bva04g02840 388 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 25 385 - -
Bva04g02840 388 MobiDBLite consensus disorder prediction 294 317 - -
Bva04g02840 388 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 172 295 IPR006502 -
Bva04g02840 388 PANTHER OS03G0796600 PROTEIN 25 385 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02840 Bva-Chr4 24321233 24323506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02840 - - vvi:100245954 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02840 04 24321233 24323506 Bva13g02766 13 20231400 20233617 BWGD