Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02837 ATGGCCATTGCCCTGAAATCTGCTAGCTTCTTCCAATTGAAGAAAACTGATATCAATTTCCAGGTTCGTGTTCCCTACGGGAAACCCATAATATCTGTAAGAAAGTGTGCTCCTATGGCGGCTATCTGCACCTCACCAACTGTTGGGCTCTCTGAAACATTCACCAGActgaaaaaagaaggaaaaGTGGCTTTAATCCCATACATTACTGCCGGGGATCCTGACCTTTCAACCACAGCAGAAGCATTAAAGGTGCTTGATTCATGTGGGTCTGACATAATCGAGCTAGGTGTTCCTTACTCTGATCCTTTGGCAGATGGTCCTGTTATCCAGgCTGCTGCTACACGTTCCTTGGCAAAGGGGACCAATTTTGATTCTATTATTTCTATGTTGAAAGAGGTAGTTCCTCAGTTGTCTTCTCCAATTGCACTGTTTACTTATTACAACCCAATACTCAAGCGTGGTGTTGACAGATTTATGTCCACCATACAAGATGCTGGTGTACATGGGCTTGTGGTCCCAGATGTTCCTTTGGAAGAGACAGTAGCTTTAAGGACAGAGGCTAAGAAGAATGGGATTGAGTTGGTACTCCTCACAACACCCACTACTCCAAGAAATCGAATGAAAGCCATTGTCGAAACTTCAGAAGGCTTTGTTTATCTTGTAAGCTCAGTTGGAGTCACTGGAGCCCGAGCATCGGTTAGTGCTAAGGTTCAGTATCTCTTGGCGGAAATTAAAGAGgaAACAACTAAGCCTATAGCGGTAGGTTTTGGCATATCAAAACCTGAACATGTGAAACAGGTAGCTGGATGGGGAGCTGATGGTGTGATTGTTGGCAGTGCCATAGTGAAGTTGCTTGGCGAGGCCAAATCTCCACAGGATGGGTTGAAAGAACTTGAAGAGTTCACCAAATCCTTGAAATCTGCACTTGTTTG 935 0.4374 MAIALKSASFFQLKKTDINFQVRVPYGKPIISVRKCAPMAAICTSPTVGLSETFTRLKKEGKVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLAKGTNFDSIISMLKEVVPQLSSPIALFTYYNPILKRGVDRFMSTIQDAGVHGLVVPDVPLEETVALRTEAKKNGIELVLLTTPTTPRNRMKAIVETSEGFVYLVSSVGVTGARASVSAKVQYLLAEIKEETTKPIAVGFGISKPEHVKQVAGWGADGVIVGSAIVKLLGEAKSPQDGLKELEEFTKSLKSALV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02837 311 SUPERFAMILY Ribulose-phoshate binding barrel 50 290 IPR011060 -
Bva04g02837 311 Gene3D Aldolase class I 49 311 IPR013785 -
Bva04g02837 311 Hamap Tryptophan synthase alpha chain [trpA]. 60 309 IPR002028 GO:0004834|GO:0006568
Bva04g02837 311 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 45 310 IPR002028 GO:0004834|GO:0006568
Bva04g02837 311 CDD Tryptophan_synthase_alpha 64 307 IPR002028 GO:0004834|GO:0006568
Bva04g02837 311 Pfam Tryptophan synthase alpha chain 54 309 IPR002028 GO:0004834|GO:0006568
Bva04g02837 311 ProSitePatterns Tryptophan synthase alpha chain signature. 94 107 IPR018204 GO:0004834
Bva04g02837 311 PANTHER TRYPTOPHAN SYNTHASE ALPHA CHAIN 45 310 - -
Bva04g02837 311 TIGRFAM trpA: tryptophan synthase, alpha subunit 54 307 IPR002028 GO:0004834|GO:0006568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02837 Bva-Chr4 24303848 24308161 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02837 K01695 - gmx:100808400 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02837 04 24303848 24308161 Bva04g02837 04 24303848 24308161 ECH