Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02832 ATGAGTTCCGACGTCAAGCGCGGAAAAAAGCGTGGCAGCTACAACTGTGGCCGATGTGGTCTCCCCAAGAAGGGCCACAACTGCCATATCAAAACCCCCACCTCCATTGCTACTACCCCCATCGGTTCATCTGCATCCACCTTTTCTGCCATTTCTGCGCCCTCATCGGTGTCTGTAGTCCGTCAGCCGCTGCCGCGGCAGCCTTATTCCCACCTCCGTCGAGCGCTATCGTTCGATGATGTCGATGACCAGGCCGGCGGATTAGATTCACGGGAGTCAGATGATGGAGATCCGTTGCCAGAACCAGAGCAGGATCTGGATTCGAGTGGGTTGCCGGCGAACCTTCTATGGGAAGTGTTGAGGAGGTTGCCGCCGTCTGGGTTATTGTCAGCTGCGAAGGTCTGTACAGGGTGGAGGGATATGGCAAAGAGGTTGTGGAAAGCAGCGGAGGAGCTGAGGCTCAGGGTTCCAGCAAGAGCTCAGGTCGGATTTGTGGCATCAATGCTGCAGAAGTGTCCAAGGCTTGTGAGGCTCTCTCTTAGAATGGAAAGTGATTTAGATTCAACGATGCTGGCCTGCATTGCATTCTCATGCCCCAATCTGGAATTTATGGAGATCTCGACATCTAATACGGCAAGCAATCGGATCAATGGGGATGAATTAGGTAGATTTGTTGCAGATAAAAGAAGCCTTAAAAACCTTAAGATGGAGGGCTGTTCCAATCTGGGGGGTTTTATTCTCTGTTCGTCAAGTCTTACTACGCTCTGGCTATCGGATCTACACTCTCATTCTAAGATGGTATTTAACTGTCCCCAGTTAAGAGAGATTTCCTTGGAATTTAGCCTCCAAGAAAATGATGCTACTGATCTCGTCACTATGGTTGAAGGTTGGGGACGAAGTTGCCCGAGGTTGCAAAACATACATATAGCTTCACTGCGGCTTTCCCATGCTACTGTGCTTGCTCTTACAGCTGCTCAGTTGAGGGGGCTGCGAATGCTTTCACTCGTTCTGGGATCTGAAATTACGGATGCATCCGTTGCTGCTATTGCCTCAAGCTATCCAAATCTAGAATTGCTTGATCTCAGTGGATCTAGCGTTAGCGACAGTGGTATTGGAATAATCTGCAATGTCTTCTCTGAAACATTATCAAGACTCCTCCTTGCTCTTTGCCCTAACGTGACTTCAAGTGGCATTCAATTCGCTACTGCACAATTGCCGCTTCTCGAAGTTATGGACTGTGGCATGACCATATCTGATCCTGATTCCGATGATCTATTGTCTGATGAAAAATGCAAAGGCGAAATGCAGAAAACATCCAGTGCTAATTTGCACTTTGTGAACCAAAAGCTAATTATCAAACATAACCGTCTGAAGAAACTCAGTTTATGGGGTTGTTCTGGTTTAGATGCCCTATATTTAAATTGTCCCCAACTCAAtgatttaaatctaaattcttGTAAAAATTTGCAACCAGAGAGATTGTTGCTTCATTGCCCCAGTTTACAAAATGTGCATGCATCGGGTTGTCTGCATACCGTAGTCGGGGCTATCCAAAGTCAGGTCTGCAATGATTTTATTGCCATGGAAAATCTATCACCTAGTAAGCGTCTACCTGATGGCTCCAAAAGGGTTCTGGTTCCGCATTTTCTCAGTGGCGAGTCTGCTGATGATGAAAAGAAACGGAGGAGGATCGAGAGACGGCCTTGTAATGTGCTAGTGGACTG 1724 0.4704 MSSDVKRGKKRGSYNCGRCGLPKKGHNCHIKTPTSIATTPIGSSASTFSAISAPSSVSVVRQPLPRQPYSHLRRALSFDDVDDQAGGLDSRESDDGDPLPEPEQDLDSSGLPANLLWEVLRRLPPSGLLSAAKVCTGWRDMAKRLWKAAEELRLRVPARAQVGFVASMLQKCPRLVRLSLRMESDLDSTMLACIAFSCPNLEFMEISTSNTASNRINGDELGRFVADKRSLKNLKMEGCSNLGGFILCSSSLTTLWLSDLHSHSKMVFNCPQLREISLEFSLQENDATDLVTMVEGWGRSCPRLQNIHIASLRLSHATVLALTAAQLRGLRMLSLVLGSEITDASVAAIASSYPNLELLDLSGSSVSDSGIGIICNVFSETLSRLLLALCPNVTSSGIQFATAQLPLLEVMDCGMTISDPDSDDLLSDEKCKGEMQKTSSANLHFVNQKLIIKHNRLKKLSLWGCSGLDALYLNCPQLNDLNLNSCKNLQPERLLLHCPSLQNVHASGCLHTVVGAIQSQVCNDFIAMENLSPSKRLPDGSKRVLVPHFLSGESADDEKKRRRIERRPCNVLVD 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02832 574 ProSiteProfiles F-box domain profile. 105 149 IPR001810 GO:0005515
Bva04g02832 574 SMART LRR_CC_2 475 500 IPR006553 -
Bva04g02832 574 SMART LRR_CC_2 327 352 IPR006553 -
Bva04g02832 574 SMART LRR_CC_2 301 325 IPR006553 -
Bva04g02832 574 SMART LRR_CC_2 353 377 IPR006553 -
Bva04g02832 574 MobiDBLite consensus disorder prediction 82 97 - -
Bva04g02832 574 PANTHER F-BOX/LRR-REPEAT PROTEIN 17-LIKE ISOFORM X1 6 573 - -
Bva04g02832 574 SUPERFAMILY F-box domain 97 150 IPR036047 GO:0005515
Bva04g02832 574 MobiDBLite consensus disorder prediction 82 109 - -
Bva04g02832 574 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 6 573 - -
Bva04g02832 574 Gene3D Ribonuclease Inhibitor 285 427 IPR032675 -
Bva04g02832 574 Gene3D Ribonuclease Inhibitor 101 284 IPR032675 -
Bva04g02832 574 Gene3D Ribonuclease Inhibitor 438 523 IPR032675 -
Bva04g02832 574 SUPERFAMILY RNI-like 166 397 - -
Bva04g02832 574 Pfam F-box domain 109 144 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02832 Bva-Chr4 24278299 24282470 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02832 - - adu:107473464 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02832 04 24278299 24282470 Bva04g02832 04 24278299 24282470 ECH