Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02828 ATGGCCACCATCTCCGCTAGCGCTCCAACCTCATCTATGATCCGTGCAGGTCTTGTGCACAAGCGACCTCTTGGAGTCTCAGCCTCTCCTGTTCTAGGGTTGCCAACAATGGCTAAGGTGGGCAAAGTGAGATGCTCCACTGAAGAAAAGCCGTGTGTGAAGGAATGCAGCTCAAAGATGGGGATGGGAGCATCGTTGATGTTGGCAGCTGCTGCTGCAACCATGTCTAGCCCAGCCATGGCTTTGGTTGACGAAAGATTGAGCACTGAAGGAACAGGGCTTCCCTTTGGCCTCAGCAACAACCTTCTTGGTTGGATCCTCTTCGGTGTCTTTGGTCTTATATGGTCTCTCTACATTGTCTACACTGGAGGTCTCGACGAGGATGAAGAGTCAGGATTGTCTCTCTA 407 0.516 MATISASAPTSSMIRAGLVHKRPLGVSASPVLGLPTMAKVGKVRCSTEEKPCVKECSSKMGMGASLMLAAAAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWSLYIVYTGGLDEDEESGLSL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02828 135 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 135 - -
Bva04g02828 135 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
Bva04g02828 135 Pfam Photosystem II reaction centre W protein (PsbW) 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02828 Bva-Chr4 24264318 24265236 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02828 K02721 - zju:107425881 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02828 04 24264318 24265236 Bva13g02751 13 20156148 20157058 BWGD
Bva04g02828 04 24264318 24265236 Bva04g02828 04 24264318 24265236 ECH