Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02827 ATGAAGCAATTTCGTCGGTGGTGGAGGATCCTGATCCTCTCTTTGCTCTTTGTTTCTGTTGTTGCTCCTCTCGTTTTCTTCTCCCATAGGCTTAAATTTCTCGCCGGACGGAGAGAGTTTATTGAAGATTTAGCAAGTACTACGTATCGGAcagatattataaaattgaatgcCATAGGACAGGAAGATGCTGAAGGACTAGAAGGGCCTAAGGAGGTTgtttataaagataaagattttCTTTCAGCTATTAGCTACAGTTCAAAGAAGACTAATGATTCTGAAGAATATAGAAACGAAGGGCACAGGAGTAACCTTTTTGAAAGATTTAGCCATGACCAAAGAGGAAACCAGCAAGTTCACGAGAAAGAAGCCTCCTCCGTGGCTGGAGAGAAGaataaatttaatcaaataatagatGGGAATACACACTCAGAGTCACACGGAACAACTGATGAGAATCTTAAAGGGACAAAAAAGGAGCAATCTGATCGAAAAGCAACCCGACGTCATCATAGTTTACGCTCTCAGTCACTGAAAGggacaaataagaaaattagggAGATCAAAGATCAGATCATTAGAGCCAAAGCATACTCAAATTTTGCACCACCAAGCAGCAACTCGCACTTGGTGAAGGAGTTGAAGCTGCGGATTAAAGATATGGAAAGAGCAGTTGGTGAAGTTACAGAAGATTCAGACTTGTCAAGGAGTGCTTTGCAGAAAATGAGACGCATGGAGGCTTCATTGTTGAAAGCTGGTCGTGTTTACCCAGACTGCTTTGCCATGGCAGTTAAACTTCGTGCAATGACTAATAGTGCTGAAGAACAAGTTCGttctcagaaaaatgaagtGACATATCTTGCTCATCTTGCTGCTAGAACAACTTCGAAAGGCATTCATTGTCTTTCTATGCGGTTGACCGCAGAATACTTTGCCCTGCCATTTGAGGAGAGGAAGCTCCCAAATGAAAGGAAGATTCATGATCCAAAGCTTTATCATTATGCTGTTTTCTCTGATAATGTTCTGGCATGTGCTGTCGTTGTTAAATCCACTGTTTCCACTGCCATGGAACCAAAGAAACTTGTCTTCCATATTGTGACCGATTCACTCAACTCCCCAGCAATCTCAATGTGGTTCTTATTAAACCCACCCGGCAAAGCCACAATCCACATTGAGAACATAGAGAACTTTAAATGGTTGTCTAAATACAGTAGcttgaagaaacaaaattccAGTGATACGAGATATACTTCTGAACTGAATTATCTACGCTTCTATCTGCCAGATATCTTCCCTGctctaaataaaattgtgctcTTTGATCATGACGTGGTTGTACAACGAGATCTCCGTGGACTATGGAATGTCAATATGGAAGGAAAAGTAGTTGGAGCAGTTGGTACTTGTCATGAGAGTGAAGCCTCTTTTCTTACGATGTATATGTTAATCAACTTCTCAGATCCGTTTATCGCAAAGAGATTTGATGCCAATGCATGCACATGGGCATTTGGGATGAATGTATTCAATTTGCAAGAGTGGAAGAGGCAGAATTTAACTGACGTATACCACAGATATTTGCAAATGGGTTCTCAGAGACCACTATGGAGTGCTGGAAGCTTGCCTTTAGGCTGGGTCACCTTCTATAACAAGGTGAAGGTGCTGGACAGACGATGGCATGTTCTTGGCCTTGGTTATGATTCAGGTATAGACCAAACTGAAATTGAGCGGGCCGCAGTCATACACTATGATGGAGTTAGGAAGCCATGGATGGATACTGCCGTGGGAAGATATAAAGGTTATTGGACCAAGTTTGTGAAGTATGACCACCCTTTTTTGCAGCAGTGCAATCTCCATGACTA 1862 0.3969 MKQFRRWWRILILSLLFVSVVAPLVFFSHRLKFLAGRREFIEDLASTTYRTDIIKLNAIGQEDAEGLEGPKEVVYKDKDFLSAISYSSKKTNDSEEYRNEGHRSNLFERFSHDQRGNQQVHEKEASSVAGEKNKFNQIIDGNTHSESHGTTDENLKGTKKEQSDRKATRRHHSLRSQSLKGTNKKIREIKDQIIRAKAYSNFAPPSSNSHLVKELKLRIKDMERAVGEVTEDSDLSRSALQKMRRMEASLLKAGRVYPDCFAMAVKLRAMTNSAEEQVRSQKNEVTYLAHLAARTTSKGIHCLSMRLTAEYFALPFEERKLPNERKIHDPKLYHYAVFSDNVLACAVVVKSTVSTAMEPKKLVFHIVTDSLNSPAISMWFLLNPPGKATIHIENIENFKWLSKYSSLKKQNSSDTRYTSELNYLRFYLPDIFPALNKIVLFDHDVVVQRDLRGLWNVNMEGKVVGAVGTCHESEASFLTMYMLINFSDPFIAKRFDANACTWAFGMNVFNLQEWKRQNLTDVYHRYLQMGSQRPLWSAGSLPLGWVTFYNKVKVLDRRWHVLGLGYDSGIDQTEIERAAVIHYDGVRKPWMDTAVGRYKGYWTKFVKYDHPFLQQCNLHD 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02827 620 Coils Coil 264 284 - -
Bva04g02827 620 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 619 IPR029993 GO:0047262
Bva04g02827 620 PANTHER HEXOSYLTRANSFERASE 1 619 - -
Bva04g02827 620 Coils Coil 212 232 - -
Bva04g02827 620 MobiDBLite consensus disorder prediction 109 129 - -
Bva04g02827 620 MobiDBLite consensus disorder prediction 146 168 - -
Bva04g02827 620 MobiDBLite consensus disorder prediction 109 180 - -
Bva04g02827 620 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 335 612 IPR029044 -
Bva04g02827 620 MobiDBLite consensus disorder prediction 130 145 - -
Bva04g02827 620 Pfam Glycosyl transferase family 8 302 593 IPR002495 GO:0016757
Bva04g02827 620 CDD GT8_like_1 333 607 - -
Bva04g02827 620 SUPERFAMILY Nucleotide-diphospho-sugar transferases 333 617 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02827 Bva-Chr4 24259212 24263848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02827 1 619 Glycosyltransferase AT1G06780 50.314 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02827 K13648 - gmx:100793193 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02827 04 24259212 24263848 Bva13g02750 13 20150789 20155578 BWGD
Bva04g02827 04 24259212 24263848 Bva04g02827 04 24259212 24263848 ECH