Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02817 ATGCAGAAAGATTTCAACAAGAAGCCCAGCCTCACACAGATCGTGGTAGCCTCATCTATTGGGCTGATATTTGCTATAGTAATGCATTATCGGCTCAGGAAGATCAGAGATCAGAAGATCATCCCGCGTCTAAGGTTGTCACGCTCAGGCCATGCCCCAAAGCTTGAAAGGTTTTCCCATTATGTAGCTAGGCAAATGGGGTTCAACGATAGGAGAGAATGTCAGCATCTGTGTAAGTTGTCTTCTGAATACATAAGCAAATGTGAGGGATGTGAAGATGATATATATGCGTTCTTTGAAAACGAACCAGATGCTGATTCACTTTTTGTGAAGcttgtggaggagtttgagagaTGCATTCTTAGTTACTGTGCATTCCATTGGAGCCATGCTGATATACTGATAGCTCAGGTTTTGAGCTGTGAAACTGAGCCCAAAAAGAAACTCAAGCACATAGTTATGGCCGCAACTAGGGAGCAAAGGTTTGAGAGGGTGACCAAGAATCTGAAGGTCGCAAGAGTCTTCAACACATTAGTAGAAGAGATGAAAGCAATGGGACTCGCAGCAAACGATGACTCCCGATGTACTGAGGTGATGGCTCCAGTAGCTCACAGTGATAGGAGTCCAGTGCTGCTCCTCATGGGTGGTGGTATGGGAGCTGGGAAGAGCAGTGTCCTTAAAGACATTCTCAAAGAACCATTCTGGGCAGGAGCAGCAGGAAATGCAGTAATCATTGAAGCTGATGCCTTTAAAGAATCAGATGTCATCTATAAGGCCCTTAGCTCAAGAGGGCATCATGACATGATTCGAACAGCTGAGCTGGTACACCAATCATCTACAGATGCCGCCTCGTCCCTCCTGGTGACAGCACTAAATGAGGGGCGGGACGTAATTATGGATGGTACACTTTCCTGGGTACCATTTGTAGTGCAGACAATAACAATGGCCAGAAATGTCCACCGCCGCAGTTACCGCATGGGACCTGGTTACAGGAAAGGTGACGATGGAACTGTAACAGAAAACTATTGGGAACGGCTTAAAGatgaagaagcagaaaaagtCGGAGGCAAAAGGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTATGTGATGCTTACACGGCAGTGGTTAGAGGCATAAGGAGAGCTATTATGTCTAGAAGAGCAGTAAGAGTAAAGTCACAACTGAAATCCCATCAGAGATTTGCTGAAGCATTTCCCACTTACTGTCAACTTGTAGACAATGCCCGACTATATTCCACAAATGCATTGGAAGGCCCACCAAAGTTGATAGGATGGAAAGAGAGAGACAAGACACTGCTTGTTGATCCAGATGAAATTGACTGCTTGAAGAGGGTTGCAAGGTTGAACCCGGATGCAGAGACCCTATATGATCTTTATAAGCATTCTAACCCAGCTCGCGTAGCTGGATCAGTATGGAAAGACATTTTATTATCACCTTCAAGGTTGAACATCCAACAAGAGCTCAAGTATTCGATCCAAAAGGTTGAGAGATTGAAATCATA 1529 0.4375 MQKDFNKKPSLTQIVVASSIGLIFAIVMHYRLRKIRDQKIIPRLRLSRSGHAPKLERFSHYVARQMGFNDRRECQHLCKLSSEYISKCEGCEDDIYAFFENEPDADSLFVKLVEEFERCILSYCAFHWSHADILIAQVLSCETEPKKKLKHIVMAATREQRFERVTKNLKVARVFNTLVEEMKAMGLAANDDSRCTEVMAPVAHSDRSPVLLLMGGGMGAGKSSVLKDILKEPFWAGAAGNAVIIEADAFKESDVIYKALSSRGHHDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRSYRMGPGYRKGDDGTVTENYWERLKDEEAEKVGGKRRKPYRIELVGVVCDAYTAVVRGIRRAIMSRRAVRVKSQLKSHQRFAEAFPTYCQLVDNARLYSTNALEGPPKLIGWKERDKTLLVDPDEIDCLKRVARLNPDAETLYDLYKHSNPARVAGSVWKDILLSPSRLNIQQELKYSIQKVERLKS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02817 509 Pfam Zeta toxin 203 316 IPR010488 GO:0005524|GO:0016301
Bva04g02817 509 Gene3D - 190 439 IPR027417 -
Bva04g02817 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 321 IPR027417 -
Bva04g02817 509 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 508 - -
Bva04g02817 509 PANTHER UNCHARACTERIZED 1 508 IPR044802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02817 Bva-Chr4 24213069 24216152 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02817 - - adu:107473533 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02817 04 24213069 24216152 Bva13g02740 13 20102058 20105283 BWGD
Bva04g02817 04 24213069 24216152 Bva04g02817 04 24213069 24216152 ECH