Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02805 ATGATCGAATGTACTACTGCATCTCGTTCTCGTCTTCGACCATGTTCACCGCCACATCCACTCACTGTACCTGCGATTGATCAAACACTAACCTTAATTCCAGACCTCCCCAACGATGTCGCAGCGCTCATCCTCTCCTTCGTTCCTTACTCCCACCATGGTCGCCTCAAACCCACCTGCAAATCTTGGAGATTGTTTTTCTCCTCCAAAAGTTTGATTTCTCTCCGCCATCTTCACCGTCGTCTCTCTCACCTTGTTTGTATTTTCCCGCAAGACCCTTCCATAGCTTCACCCTTCCTCTTCGACCCCAAATCCCTTGCTTGGTGCCCTCTTCCCCCTATGCCCTGCAATCCACACGTCTATGGCCTCTGTAACTTCACCTCGATTTCGGTTGGCCCTTACCTTTATGTACTCGGAGGATCACTTTTCGACACCCGATCATTCCCAATTGATCGTCCCTCCCCAAGTTCCACCACTTTCCGTTTCAATTTTTACGATTTCTCATGGGAACCCCTTTCCCCCATGCTGTCCCCGCGAGGCAGCTTTGCCTGCGTGGCGTTACCTGATTCTAACCAAATTTTGGTGGCGGGTGGTGGCTCCAGGCATACAATGTTTGCAGCGGCTGGGAGTCGAATAGGTTCGGTAGAAAGGTACGATATTGGTAAGGATGAATGGGTTGCTATGAATGGATTACCCAGGTTTCGAGCAGGATGCGTTGGTTTTTTTGTTGGGAATGGAACAGAGGATAGCGGCGAATTCTGGGTGATGGGTGGATACGGTGCTTCGAGGACTATTTCTGGGGTGTTTCCTGTGGACGAGTATTATAGGGATGCGGTGGTGATGGAATTGAAGAATGGGAGTGAGGAAGGGACGTGGAGAGAGGTTGGGGATATGTGGCGAGAAGGGGAAAGGATGAGGCAGGGAAAGATTGTTGTCGTCGAGGAAGAGAATCAAAGGTGCCCCGGGGTTTTCATGCTCAATGGGAATAAGATTTTGAGATATGACATGTCTTCAAATAGATGGAAATTTGAATCGCGCGTGCCAAGAAAAGCTCCTTACAACTCGTCATTTGGTTTTGTAGCCTTAGACAGGGAATTGTATGTAATCACACATTTAAGTGTTGCTGACTCGACAGAAACACGTAGGTCCAGACACCACAAGAGGGCGGGGACACTGTACGTACAAATCTATCACCCAGAGAAGAAGATTTGGAGATCTCTCGTCACAAAGTCGCCTTTCAGTTACCCCATAGATATTAATACTGCTGTGTTCACCTCAATTTGCCTGTG 1289 0.4856 MIECTTASRSRLRPCSPPHPLTVPAIDQTLTLIPDLPNDVAALILSFVPYSHHGRLKPTCKSWRLFFSSKSLISLRHLHRRLSHLVCIFPQDPSIASPFLFDPKSLAWCPLPPMPCNPHVYGLCNFTSISVGPYLYVLGGSLFDTRSFPIDRPSPSSTTFRFNFYDFSWEPLSPMLSPRGSFACVALPDSNQILVAGGGSRHTMFAAAGSRIGSVERYDIGKDEWVAMNGLPRFRAGCVGFFVGNGTEDSGEFWVMGGYGASRTISGVFPVDEYYRDAVVMELKNGSEEGTWREVGDMWREGERMRQGKIVVVEEENQRCPGVFMLNGNKILRYDMSSNRWKFESRVPRKAPYNSSFGFVALDRELYVITHLSVADSTETRRSRHHKRAGTLYVQIYHPEKKIWRSLVTKSPFSYPIDINTAVFTSICL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02805 429 Gene3D - 80 414 IPR015915 GO:0005515
Bva04g02805 429 SUPERFAMILY Kelch motif 89 407 IPR015915 GO:0005515
Bva04g02805 429 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 22 429 - -
Bva04g02805 429 Pfam F-box domain 34 71 IPR001810 GO:0005515
Bva04g02805 429 SMART kelc_smart 134 189 IPR006652 GO:0005515
Bva04g02805 429 SMART kelc_smart 192 245 IPR006652 GO:0005515
Bva04g02805 429 Pfam Kelch motif 123 175 IPR006652 GO:0005515
Bva04g02805 429 Pfam Kelch motif 191 231 IPR006652 GO:0005515
Bva04g02805 429 SUPERFAMILY F-box domain 31 117 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02805 Bva-Chr4 24156272 24159208 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02805 - - pper:18768960 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02805 04 24156272 24159208 Bva04g02805 04 24156272 24159208 ECH