Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02802 ATGGAGAAGTTCCTCTGTACCTTATTAATGGACTCCACCCAGCCGATTTCTGAGCGATTCAGAGCCCTATTCTCTCTCCGGAACCTCAAAGGTCCCGACCCCCGCAACGCCCTTATTCTCGCCACAAGggattcttcaaatttattggCACATGAGGCTGCATATGCTCTGGGTCAAATGCAGGATGTGGATGCCATCCCTGCTCTGGTATCAGTTCTGAATGATCTGTCTTTGCACCCTATTGTTCGCCACGAGGCAGCAGAAGCACTTGGTGCAATTGGTTTAGATGGTAATGTCCCCCTCTTGAAGAATAGCTTGGATTTAGATCCAGCGGAGGAGGTTCGAGAGACATGTGAATTGGCTCTTAAACGTATTgagcatttaaaaaattgtgatgaATCGTCTGCAACTGATATATCACCTTTTAAATCTGTTGATCCAGTAGCACCAACTAGTTCTTGTTCTTCTGTGAATCAGCTAAGGAAAGTACTTCTggatgaagaaaaaggaatgtaTGAACGGTATGCAGCTCTTTTCGCCCTTCGAAATAATGGTGGAAATGAAGCTCTTGCTGCTATAATTGATTCCTTGGGTTCAAAAAGCGCTCTTCTGCGCCATGAGGTTGCTTATGTCTTGGGCCAATTGCAAGACAAAGCTGCTTCAGCTGCCCTATCCGATATACTTAGGGATGTGAATGAGCATCCAATGGTTAGACATGAAGCTGCGGAAGCTCTTGGCTCCATAGCAGATGACCAAAGCGTAGCACTCTTGGAGGAGTTTGCAGCCGATCCCGAGCCTATTGTCTCACAAAGTTGTCAAGTTGCTCTAAGCATGCTAGAGTTTGAACGGGCAGGGAAATCTTTCGAGTTCCTCTTCATGCGCAATCCTCTCGTGCATTG 899 0.4394 MEKFLCTLLMDSTQPISERFRALFSLRNLKGPDPRNALILATRDSSNLLAHEAAYALGQMQDVDAIPALVSVLNDLSLHPIVRHEAAEALGAIGLDGNVPLLKNSLDLDPAEEVRETCELALKRIEHLKNCDESSATDISPFKSVDPVAPTSSCSSVNQLRKVLLDEEKGMYERYAALFALRNNGGNEALAAIIDSLGSKSALLRHEVAYVLGQLQDKAASAALSDILRDVNEHPMVRHEAAEALGSIADDQSVALLEEFAADPEPIVSQSCQVALSMLEFERAGKSFEFLFMRNPLVH 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02802 299 Pfam HEAT repeats 39 123 - -
Bva04g02802 299 PANTHER PBS LYASE HEAT-LIKE PROTEIN 8 283 - -
Bva04g02802 299 Hamap Deoxyhypusine hydroxylase [DOHH]. 1 289 IPR027517 GO:0008612|GO:0019135
Bva04g02802 299 Pfam PBS lyase HEAT-like repeat 237 263 IPR004155 -
Bva04g02802 299 Pfam PBS lyase HEAT-like repeat 174 197 IPR004155 -
Bva04g02802 299 PANTHER DEOXYHYPUSINE HYDROXYLASE 8 283 - -
Bva04g02802 299 Gene3D - 3 139 IPR011989 -
Bva04g02802 299 Gene3D - 146 291 IPR011989 -
Bva04g02802 299 SMART E-Z type HEAT repeats 80 109 IPR004155 -
Bva04g02802 299 SMART E-Z type HEAT repeats 235 264 IPR004155 -
Bva04g02802 299 SMART E-Z type HEAT repeats 202 231 IPR004155 -
Bva04g02802 299 SMART E-Z type HEAT repeats 47 76 IPR004155 -
Bva04g02802 299 SMART E-Z type HEAT repeats 16 45 IPR004155 -
Bva04g02802 299 SMART E-Z type HEAT repeats 171 200 IPR004155 -
Bva04g02802 299 SUPERFAMILY ARM repeat 48 278 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02802 Bva-Chr4 24142558 24145151 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02802 K06072 - gmx:100815364 504.212