Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02801 ATGGCGAATCCCAACCCTCAGAAACCGTGGAAGGCGGAGTACGCCAAGTCGGCGCGATCTTCATGCAAGACTTGCAAGAGTACTATAGACAAAGAAATATTCCGTCTCGGCAAGATGGTCCAAGCCACTCAGTTTGATGGCTTTATGCCTATGTGGAATCATGCTGCTTGTATATTGAAGAAAGCCAACCAGATCAAATCaatTGATGATGTTGAAGGCATAGAGTCACTTCGTTGGGAAGACCAGCAGAAGATCAGAGAGTACATAGAGAGTGGTGGGCCAACAAAGTCAAATGCCACCAAAAATACGGAATATGGTATTGAAGTTGCACAAACTTCTCGTGCTACATGCAGGCATTGTGGtcaaaaaattgtcaaaggAGAGgttCGTATATCTGCTAACCCTAATGGTCAAGGTGCTAAAGGTTTGGCGTGGCACCATGCCAAGTGTTTCATGGAATCATCTCCATCAACTCAAGTGGAAAAGTTGTCTGGATGGAATAATCTCTCATCATCTGATCAATCAGCTGTCAGTAACTTGGCTAAGAAGGCTTCCTCTAGCAAAAAAAGTGGTCGTGCAAACATTGAGCCTCTAGAGGTTAAAGCAGCTACACAACAATCAACTTCCAAAGCTGGCGAAAAACGTAGGATGGATGCCAGTGGCAACCAGAAGTCAAAAGTCAGTAAGGCCGAGGGAGATGTGTCAGCAGGTAGGGCAGCATtggtgaaaaataataatggctCAGGGGAACCATCTAATTGTGAGAATAGACTGGAGGCCCAGACCAAAGAATTCTGGGCTTTAAAAGATGATCTTAAGAAGCATGTGACAACAGCTGAGTTGCGTGAGATGCTGGAAATCAATGGTCAAGATACAACAGGATCAGAACTTGATTTGCGTGACCGCTGTGCTGATGGAATGATGTTTGGAGCACTTGCTTCTTGCACAATATGCACTGGTTGCCTGCGTTATTCTGGCGGAATGTATCGGTGCCATGGATACATTTCTGAATGGAGCAAATGTTCTTACTCTACCACTGAACCGATTCGCATTAGAGGAAAGTGGAAAGTCCCGGCAGAAACAAATAATCAGTACCTCAAAAAGTGGTTTAGATCGCAAAAGGCTGAGAGACCTGTTAGGATACTGCCTCTAGGATCATTAAAGAATCCATCTGAAAGTCAAATTACTGCTTGCCAGCATCAACCTTCAAATAGTGAAAGTTTGGGAGACTTAAGAGTTGCTATTGCTGGATTGCCTAAAGACTTTATTAAAGAATGGAAACGCAAAATTGAGGGGGTTGGTGGTGTGCTTCATGCAAAAGTAAAGAAAGATACTAATTGCTTGGTGGTGAGTGGATTGCTGGATGATCAAGAAGCTGAGATGCAGAAGGCAAGGAGGATGAGAATACCAATAGTCAGAGAGGACTACCTGGTTGATtgtattgaaaaaaagaagaagcttccATTTGATTTGTATAAAGTAGAAGCGATTGGTCAGGCCTCTAGCATGGTCACCATCAAAGTGAAGGGGCGAGGTGCTGTTCGTGAGGAATCTGGCCTACAGGATTCTGGTCACATACTTGAAGATGGGAACAGCATATATGATACCACTTTGAGCATGTCTGACTTATCTTCTGGTGTGAACAGTTACTATATTCTCCAAATAATCCAAGAAGACAAGGGGTCAGATTGCTATGTGTTCCGAAAATGGGGTCGTGTGGGGAATGACAGGATTGGAGGATCCAAATTGGAAGAGATGCCAAAGTCAGATGCAATCCGTGAATTTAGACGATTATTCTTTGAGAAGACTGGCAATCCTTGGGATGCTTGGgaacaaaagaattttcagaAGCAACCTGGCAGATTCTTCCCCTTGGATATTGATTATGGGGTTAACAAACAGGTCTCAAAGAAACTGCAAAATGATGTAGACAGCAAACTGGCCCCTCCAGTAATAGAATTGATGAAGATGCTCTTTAATGTGGAAGCATACAGATCTGCGATGATGGAATTTGAGATTAATATGTCTGAAATGCCTCTTGGGAAACTGAGCAAAAGTAATATTCAACAGGGGTTCGAGGCTTTAACAGAGATACAGAATCTGTTCAACACTAGTTATTCTGATCCGTCAGTCAGAGAGAGTTTGCTTATTAATGCTAGCAATAAGTTTTTCACTGTGATCCCTTCTGTTCATCCGCATGTTATTAGAGATGAGGTTGACTTTAAGTCAAAGGTGAAAATGTTAGAAGCCCTTCAAGACATTGAAATAGCTTCAAGAATAGTTGGATTTGATGTTGATAGCGATGCTTCCATTGATGAGAAGTATATGAAGCTTCACTGCAATATTTCTCCACTCCCACATGATAGTGAAGATTATCTATTAATTGAGAAGTTTCTCCGCACTACTCATGCCCCTACACATAAGGATTGGAATCTTGAGCTAGAAGAAGTTTTTTCACTTGAAAGGGAAGgagaatttgataaatttgctcCTTACAGAGAAAAGCTCGGTAACAGAATGCTCCTATGGCATGGTTCTAGGTTGACGAATTTTGTTGGCATACTCAGCCAAGGACTCAGAATTGCTCCTCCCGAAGCCCCAGCAACTGGCTATATGTTTGGCAAAGGGATTTACTTTGCTGATTTGATCAGCAAGAGCGCCCAATATTGCTACACTGATAAGAAAAATCCTGTTGGTCTGATGCTTTTGAGCGAAGTTGCCCTAGGGAATATGTGTGAACTGAAAAAGGCTAAGTATATGGATAAACCTCCAGAAGGAAAGCACTCTACCAAAGGACTGGGCAAGAAAGTACCTCAAGAGTCGGATTATGTAAAGTGGAGGGGTGATGTCACTGTTCCTTGTGGTAAGCCAGTATCATCCAGTGTCAAGACTTCTGAGCTCATGTACAACGAGTATATTGTTTACAATACCGCTCAAGTTAAGATGCAGTTCTTATTGAAGGTGAGGTTCCATCACAAGGGATG 2984 0.4135 MANPNPQKPWKAEYAKSARSSCKTCKSTIDKEIFRLGKMVQATQFDGFMPMWNHAACILKKANQIKSIDDVEGIESLRWEDQQKIREYIESGGPTKSNATKNTEYGIEVAQTSRATCRHCGQKIVKGEVRISANPNGQGAKGLAWHHAKCFMESSPSTQVEKLSGWNNLSSSDQSAVSNLAKKASSSKKSGRANIEPLEVKAATQQSTSKAGEKRRMDASGNQKSKVSKAEGDVSAGRAALVKNNNGSGEPSNCENRLEAQTKEFWALKDDLKKHVTTAELREMLEINGQDTTGSELDLRDRCADGMMFGALASCTICTGCLRYSGGMYRCHGYISEWSKCSYSTTEPIRIRGKWKVPAETNNQYLKKWFRSQKAERPVRILPLGSLKNPSESQITACQHQPSNSESLGDLRVAIAGLPKDFIKEWKRKIEGVGGVLHAKVKKDTNCLVVSGLLDDQEAEMQKARRMRIPIVREDYLVDCIEKKKKLPFDLYKVEAIGQASSMVTIKVKGRGAVREESGLQDSGHILEDGNSIYDTTLSMSDLSSGVNSYYILQIIQEDKGSDCYVFRKWGRVGNDRIGGSKLEEMPKSDAIREFRRLFFEKTGNPWDAWEQKNFQKQPGRFFPLDIDYGVNKQVSKKLQNDVDSKLAPPVIELMKMLFNVEAYRSAMMEFEINMSEMPLGKLSKSNIQQGFEALTEIQNLFNTSYSDPSVRESLLINASNKFFTVIPSVHPHVIRDEVDFKSKVKMLEALQDIEIASRIVGFDVDSDASIDEKYMKLHCNISPLPHDSEDYLLIEKFLRTTHAPTHKDWNLELEEVFSLEREGEFDKFAPYREKLGNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLISKSAQYCYTDKKNPVGLMLLSEVALGNMCELKKAKYMDKPPEGKHSTKGLGKKVPQESDYVKWRGDVTVPCGKPVSSSVKTSELMYNEYIVYNTAQVKMQFLLKVRFHHKG 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02801 994 ProSiteProfiles PARP catalytic domain profile. 769 994 IPR012317 GO:0003950
Bva04g02801 994 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 108 179 IPR001510 GO:0003677|GO:0008270
Bva04g02801 994 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 13 89 IPR001510 GO:0003677|GO:0008270
Bva04g02801 994 Gene3D - 100 195 IPR036957 GO:0003677|GO:0008270
Bva04g02801 994 Gene3D - 779 994 - -
Bva04g02801 994 MobiDBLite consensus disorder prediction 180 234 - -
Bva04g02801 994 Pfam WGR domain 534 612 IPR008893 -
Bva04g02801 994 ProSiteProfiles SAP motif profile. 273 307 IPR003034 -
Bva04g02801 994 SUPERFAMILY BRCT domain 403 494 IPR036420 -
Bva04g02801 994 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 50 988 - -
Bva04g02801 994 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 10 93 IPR001510 GO:0003677|GO:0008270
Bva04g02801 994 PIRSF NAD_ADPRT 3 994 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Bva04g02801 994 SMART WGR_cls 534 617 IPR008893 -
Bva04g02801 994 CDD parp_like 645 989 - -
Bva04g02801 994 Gene3D - 635 778 IPR036616 GO:0003950
Bva04g02801 994 SUPERFAMILY WGR domain-like 501 627 IPR036930 -
Bva04g02801 994 Gene3D - 311 370 IPR038650 -
Bva04g02801 994 ProSiteProfiles WGR domain profile. 523 622 IPR008893 -
Bva04g02801 994 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 105 185 IPR001510 GO:0003677|GO:0008270
Bva04g02801 994 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 645 778 IPR036616 GO:0003950
Bva04g02801 994 Gene3D - 239 310 - -
Bva04g02801 994 SMART zf_PARP_3 108 182 IPR001510 GO:0003677|GO:0008270
Bva04g02801 994 SMART zf_PARP_3 13 90 IPR001510 GO:0003677|GO:0008270
Bva04g02801 994 PANTHER DNA LIGASE 50 988 - -
Bva04g02801 994 Gene3D BRCT domain 399 503 IPR036420 -
Bva04g02801 994 Pfam PADR1 (NUC008) domain 301 350 IPR012982 -
Bva04g02801 994 Gene3D - 2 99 IPR036957 GO:0003677|GO:0008270
Bva04g02801 994 SUPERFAMILY ADP-ribosylation 778 993 - -
Bva04g02801 994 ProSiteProfiles PARP alpha-helical domain profile. 644 762 IPR004102 GO:0003950
Bva04g02801 994 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 103 201 - -
Bva04g02801 994 SMART PADR1_2 299 352 IPR012982 -
Bva04g02801 994 Pfam Poly(ADP-ribose) polymerase, regulatory domain 645 775 IPR004102 GO:0003950
Bva04g02801 994 CDD WGR_PARP1_like 524 629 - -
Bva04g02801 994 Pfam Poly(ADP-ribose) polymerase catalytic domain 789 990 IPR012317 GO:0003950
Bva04g02801 994 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 98 - -
Bva04g02801 994 SMART BRCT_7 406 484 IPR001357 -
Bva04g02801 994 ProSiteProfiles BRCT domain profile. 403 494 IPR001357 -
Bva04g02801 994 Pfam BRCA1 C Terminus (BRCT) domain 411 481 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02801 Bva-Chr4 24134002 24142100 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02801 K24070 - qsu:111987540 1584.7