Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02777 ATGGACAAGTCGAAGCTAACTCAGTTTGGTGAGAGGCTGAAGATGGGAGGGGCTCAAATGGGTCGAATTGTTAGtggaaaagtgaaggaaatatTACAATCACCAACACCCGAATCAAAAATGGTTGATGAGGCGACGTTGGAGACCTTAGAAGAGCCCAACTGGGGCATGAATTTGAGGATATGTGCAATGATCAATAGTGAAGAGTTCAATGGGTCAGAGATTGTTAAGGCCATCAAAAAGAAGATTTCAGGCAAGAGTGTTGTGAGCCAGAAGCTGAGTCTTGACTTGTTGGAAGCTTGTACTATGAATTGTGAGAAGGTTTTTTCTGAAGTGGCATCAGAGAAGGTGCTTGAAGACTTGGTTCGAATGATTGATAATCCGCAAACGGATCAAGAGAATAGAAGAAAGGCTTTCCAGTTGATCAGGGCTTGGGGAGAGTCAGAGGATCTTGCGTATCTCCCAGTGTTTCATCAAACTTACATGAGTTTGAAGGAAAAAGTTGGACCTTCAGATCTAGAAGGGGGAAATTTGTCAGATTTGCCATATTCCTTGGAGACATATATACACCAAGAGCCGATACATGCTCCTGAAGAAGACCCCATCCCTGATACAGGAGTGCCTCGTATTAatgacttttctttctcttccagTCACCCAGGCCTGACagttgaagaaaagaaggagtaTCTTGTCATTGCTCGAAACAGTCTTGAATTGCTTTCCAGCATATTAAACTCTGATGTGGAACCAAAACCTGTAAAGGAAGATTTAACTGTGAGCTTGTTGGAGAAGTGCAGGCAATCACTGCCTGTCATCAAGGGGATAGTGGAAGGAACCACAAATGATGAAGAGATACTTTTTGAAGCTTTATATCTTAATGATGAGCTACAACAAATCGTTTCCAAGTATGAGGACTTGGAATCTGCTCAAAATTCTGGAGCTCAACAATCTGGAAAAGCTGATACCTCCAAGCTTGATTCAGAAGCTGTCCAAAATCCTATTAAGCTTTCTGAAAGTTTCGAaggtgatgatgatgaatcTGGAGAGTCAGAAGCTGCTCAGGAGCTTATGCGAAAGCTTCCAAAAATCTCCAACACTCCTGAAGCCAATTCAGCCGCTTGTGTTGGTGGTCATCATGAAACAAAAACAGCAGAAAACCCAAAAGGAGAGGATGCAGAATCTACTTGCAAGAAAAATGCTGAATG 1208 0.3998 MDKSKLTQFGERLKMGGAQMGRIVSGKVKEILQSPTPESKMVDEATLETLEEPNWGMNLRICAMINSEEFNGSEIVKAIKKKISGKSVVSQKLSLDLLEACTMNCEKVFSEVASEKVLEDLVRMIDNPQTDQENRRKAFQLIRAWGESEDLAYLPVFHQTYMSLKEKVGPSDLEGGNLSDLPYSLETYIHQEPIHAPEEDPIPDTGVPRINDFSFSSSHPGLTVEEKKEYLVIARNSLELLSSILNSDVEPKPVKEDLTVSLLEKCRQSLPVIKGIVEGTTNDEEILFEALYLNDELQQIVSKYEDLESAQNSGAQQSGKADTSKLDSEAVQNPIKLSESFEGDDDESGESEAAQELMRKLPKISNTPEANSAACVGGHHETKTAENPKGEDAESTCKKNAE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02777 402 MobiDBLite consensus disorder prediction 311 402 - -
Bva04g02777 402 Pfam VHS domain 38 147 IPR002014 GO:0035091|GO:0043130
Bva04g02777 402 ProSiteProfiles VHS domain profile. 45 167 IPR002014 GO:0035091|GO:0043130
Bva04g02777 402 SUPERFAMILY GAT-like domain 195 309 - -
Bva04g02777 402 PANTHER TOM1-LIKE PROTEIN 2 1 391 - -
Bva04g02777 402 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Bva04g02777 402 MobiDBLite consensus disorder prediction 311 335 - -
Bva04g02777 402 CDD VHS 39 165 - -
Bva04g02777 402 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Bva04g02777 402 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Bva04g02777 402 PANTHER TOM1-LIKE PROTEIN 1 1 391 IPR044836 GO:0035091|GO:0043130|GO:0043328
Bva04g02777 402 Gene3D - 29 176 IPR008942 -
Bva04g02777 402 SUPERFAMILY ENTH/VHS domain 34 167 IPR008942 -
Bva04g02777 402 CDD GAT_GGA_like_plant 231 307 - -
Bva04g02777 402 Gene3D - 224 322 IPR038425 -
Bva04g02777 402 MobiDBLite consensus disorder prediction 382 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02777 Bva-Chr4 24012472 24015413 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02777 - - gmx:100803803 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02777 04 24012472 24015413 Bva04g02777 04 24012472 24015413 ECH