Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva04g02772 | ATGGGTTCTCTGCCTCCTTCATTTTCAGATTCTGTATTGCCTCCGCCATCCAAACGAGCTATTGATCTAATTGACGAAACCGCCCTCCTGAACCTCTTCAAATCCCAACAAAACCACCTTAACTTCTTCTTCAACAACATCGACCATTCCCAAACCCTATCCTTCACTAAGGCCCTTCTCAATTCCACCGGCACCATATTCTTCTCCGGAGTCGGCAAATCGGGCTTCGTTGCCCACAAGATCTCTCAGACTCTTGTCTCGCTCGGTGTCCGATCTGCATTTCTCTCCCCTGTGGATGCCCTTCATGGCGACATCGGCATTCTATGCGGTCGCGACATCGTCGTCCTCTTCAGCAAGTCTGGTACCACCGAAGAGCTGCTGAGGCTTGTTCCCTGTGTGAAGGCCAAAGGGGCCTTTTTGATCTCGGTCACTTCTGTGGAGGCAAATGTATTGGCTGGCATCTGCGATATGAACGTGCATTTGCCTCTGGAGAGAGAATTGTGCCCCTTCAATTTGGCCCCCGTCACTTCCACTGCAATCCAGATGGTTTTCGGGGACACTGTCGCAATTGCTCTTATGGCTGCCAGAAATCTTACCAAGGAAGATTATGCTGGCAATCATCCCGCAGGCAAAATCGGCAAGAGTCTTATATTCAAGGTTAGAGATCTGATGAAGAAGCAGGATGAGCTTCCCATCTGCAGGGAAGCAGATCTAATTGTGGATCAGCTTATGGAACTGACAAGCAAAGGATGCGGATGCCTGCTTGTTATAGatgaaaaacataatttgattGGGACATTTACCGATGGTGATCTACGACGCACTCTGAAAGCTAGCGGAGAGGGCATTTTCAAGCTCACTGTGGGGGTAAAATGCAACAGGAGTCCAAAAATCATTGGTCCAGATGCAATGGCAGTGGAGGCCATGAAGAAGATGGAAGCACCTCCATCAGCTGTACAGTTTTTGCCTGTAGTCAATGATGAAAATATCTTGATAGGGATTGTCACGTTGCATGATTTGGTTTCGGCTGGGTTGTG | 1037 | 0.4802 | MGSLPPSFSDSVLPPPSKRAIDLIDETALLNLFKSQQNHLNFFFNNIDHSQTLSFTKALLNSTGTIFFSGVGKSGFVAHKISQTLVSLGVRSAFLSPVDALHGDIGILCGRDIVVLFSKSGTTEELLRLVPCVKAKGAFLISVTSVEANVLAGICDMNVHLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMAARNLTKEDYAGNHPAGKIGKSLIFKVRDLMKKQDELPICREADLIVDQLMELTSKGCGCLLVIDEKHNLIGTFTDGDLRRTLKASGEGIFKLTVGVKCNRSPKIIGPDAMAVEAMKKMEAPPSAVQFLPVVNDENILIGIVTLHDLVSAGL | 345 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva04g02772 | 345 | ProSiteProfiles | SIS domain profile. | 55 | 198 | IPR001347 | GO:0097367|GO:1901135 | |
| Bva04g02772 | 345 | PIRSF | KdsD_KpsF | 14 | 345 | IPR004800 | GO:0005975|GO:0016853 | |
| Bva04g02772 | 345 | TIGRFAM | kpsF: sugar isomerase, KpsF/GutQ family | 64 | 335 | IPR004800 | GO:0005975|GO:0016853 | |
| Bva04g02772 | 345 | ProSiteProfiles | CBS domain profile. | 292 | 345 | IPR000644 | - | |
| Bva04g02772 | 345 | Gene3D | - | 26 | 214 | - | - | |
| Bva04g02772 | 345 | Pfam | SIS domain | 60 | 190 | IPR001347 | GO:0097367|GO:1901135 | |
| Bva04g02772 | 345 | Pfam | CBS domain | 292 | 343 | IPR000644 | - | |
| Bva04g02772 | 345 | Pfam | CBS domain | 220 | 277 | IPR000644 | - | |
| Bva04g02772 | 345 | ProSiteProfiles | CBS domain profile. | 224 | 286 | IPR000644 | - | |
| Bva04g02772 | 345 | SMART | cbs_1 | 295 | 345 | IPR000644 | - | |
| Bva04g02772 | 345 | SMART | cbs_1 | 229 | 277 | IPR000644 | - | |
| Bva04g02772 | 345 | CDD | CBS_pair_SIS_assoc | 216 | 341 | - | - | |
| Bva04g02772 | 345 | PANTHER | - | 1 | 345 | - | - | |
| Bva04g02772 | 345 | Gene3D | - | 215 | 343 | IPR046342 | - | |
| Bva04g02772 | 345 | CDD | SIS_Kpsf | 64 | 191 | IPR035474 | - | |
| Bva04g02772 | 345 | SUPERFAMILY | SIS domain | 31 | 345 | IPR046348 | GO:0097367|GO:1901135 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva04g02772 | Bva-Chr4 | 23980906 | 23983037 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva04g02772 | K06041 | - | jre:108995968 | 542.347 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva04g02772 | 04 | 23980906 | 23983037 | Bva04g02772 | 04 | 23980906 | 23983037 | ECH |