Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02737 ATGGGAGATAATGAAACAGTTATTGCTGAAAACTCCGTAGCTGCGAGTTACACATCAACTGGCTATGCTGGTGCCATCCCAAATCTTGTTCCTGAGCTAGCTTCTGCTGCTGCTGAGTCTGCTGGAGAAGCTTCTCAGGCCAATTCAAGTTATGGTTTTGGTTATTCTATTGTTGGTGATGGGAATGCATATAGTGGGGATCCTAATTCTGTTCTACAGCAAGCTCAATTAAACACAACAGAAGAGACTAAGCAAGGTGATGGAGTCAATGATACCAATGACACTGTCAGTGGTCATGGCAATACAGCTACAGAGTCTATTCAAGTGTCTGAGTATAGTACATCTGTAAATGGTAGTGTTGTTGGTGAGGTTCCTACTGCAACACGACTTGATAATGGAAATGCATCAGAGAATGTTGATGGATCAGCTAGTGAGAAACAGTTGGCAGATGGTTATGCAGGTGCATTGTCTGCTGAAGAAGATCGACTATGGAATATTGTAAGAGCAAATTCTTTAGATTTTAATGCTTGGACAGCCTTGATTGAAGAGACAGAGAAGGTGGCAGAGGACAACATTTTGAAGATTCGAAAAGTTTATGATGCTTTTCTTGCAGAGTTTCCTTTGTGTTATGGTTATTGGAAGAAGTATGCTGACCATGAGGCTCGTCTTGGCTCAATTGATAAAGTTGTTGAAGTTTATGAAAGGGCCGTCCAGGGGGTTACATATGCAGTGGACATGTGGTTGCATTATTGCATATTTGCTATAAGCACATATGGAGATCCAGATACGGTTCATAGGCTTTTTGAAAGAGGATTAGCTTACGTTGGAACAGATTATCTTTCGTTTCCTCTTTGGGATAAATACATTGAGTATGAATACATGCAGCAGGACTGGGGTCGGCTTGCCATGATTTACACTAGAATATTAGAGCATCCAAATCAACAACTTGATCGGTATTTCACCagCTTCAAGGAGTTAGCTGGAAATCGGCCATTGTCAGAACTAAGAACTGCTGATGAAGCAGCAGCGGTGGCAGCAACTGTTTCAGAGGCTGGTGAGCAGCAAACTAAAGAGGGCGAGGTTCATCCTGATTCAGAGGAAAATTCTTCTAAACCTCTATCAGGAGGCCCTACTTTCATGTACGGCCACTCAATGCTGCAGAGCTTGAGAATTGGCATAGTTATCTGGATTTTATTGAAAGAGAAGGCGACTTTAGCAAGCTACTTTTTAATCGGGAATTG 1241 0.4198 MGDNETVIAENSVAASYTSTGYAGAIPNLVPELASAAAESAGEASQANSSYGFGYSIVGDGNAYSGDPNSVLQQAQLNTTEETKQGDGVNDTNDTVSGHGNTATESIQVSEYSTSVNGSVVGEVPTATRLDNGNASENVDGSASEKQLADGYGALSAEEDRLWNIVRANSLDFNAWTALIEETEKVAEDNILKIRKVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTYAVDMWLHYCIFAISTYGDPDTVHRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWGRLAMIYTRILEHPNQQLDRYFTSFKELAGNRPLSELRTADEAAAVAATVSEAGEQQTKEGEVHPDSEENSSKPLSGGPTFMYGHSMLQSLRIGIVIWILLKEKATLASYFLIGN 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02737 412 SUPERFAMILY TPR-like 166 329 IPR011990 GO:0005515
Bva04g02737 412 PANTHER PRE-MRNA-PROCESSING FACTOR 39 85 353 - -
Bva04g02737 412 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 85 353 - -
Bva04g02737 412 MobiDBLite consensus disorder prediction 80 109 - -
Bva04g02737 412 Gene3D Tetratricopeptide repeat domain 164 330 IPR011990 GO:0005515
Bva04g02737 412 MobiDBLite consensus disorder prediction 346 373 - -
Bva04g02737 412 SMART hat_new_1 189 221 IPR003107 GO:0006396
Bva04g02737 412 SMART hat_new_1 223 255 IPR003107 GO:0006396
Bva04g02737 412 SMART hat_new_1 258 293 IPR003107 GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02737 Bva-Chr4 23816771 23820300 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02737 K13217 - gmx:100787373 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02737 04 23816771 23820300 Bva04g02737 04 23816771 23820300 ECH