Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02731 ATGGCAACTCTGAACTCTCTTGCATTGTCGTCTCCGCTCTCGAACTCGCTACACAAGACACGCTCTTGTTCAGTACTTCATCGAAGTACACATTCCTCATTTTGTGGTCAATCTTTACATCTGCCATGTCTGAGATTGCCAAGGTTGGCACAGAACCCCCCTATGCACATGCCTATTACAATGATGGTGAGACCAACAATACAGTTCATCCAAGGAACTGGTGAACAGACAACACCAGATGTTAGGCTTACCAAATCAAGAGACGGGACAAATGGCATGGCCATCTTCAGCTTTGATCAACCCTCAGTTTTTGATTCTTCTAGTGAAGTTGGTGATATCACTGGTTTTTACATGATTGATGAGGAAGGGGTCATTCAGTCCGTTGATGTGAGTGCCAAATTCATCAATGGAAAGCCTGCAGGAATCGAAGCTAAGTATATAATGCGGAATCCAAGAGAGTGGGATAGATTCATGAGATTCATGGAGCGATACTCTAACGAGAACGGTTtacaattcattaaaaaatg 527 0.425 MATLNSLALSSPLSNSLHKTRSCSVLHRSTHSSFCGQSLHLPCLRLPRLAQNPPMHMPITMMVRPTIQFIQGTGEQTTPDVRLTKSRDGTNGMAIFSFDQPSVFDSSSEVGDITGFYMIDEEGVIQSVDVSAKFINGKPAGIEAKYIMRNPREWDRFMRFMERYSNENGLQFIKK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02731 175 Gene3D Photosystem II Psb28 65 175 IPR038676 -
Bva04g02731 175 Hamap Photosystem II reaction center Psb28 protein [psb28]. 64 173 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
Bva04g02731 175 PANTHER - 1 175 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
Bva04g02731 175 TIGRFAM PS_II_psb28: photosystem II reaction center protein Psb28 67 173 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
Bva04g02731 175 Pfam Psb28 protein 67 172 IPR005610 GO:0009523|GO:0009654|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02731 Bva-Chr4 23791892 23793389 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02731 K08903 - gmx:100306491 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02731 04 23791892 23793389 Bva04g02731 04 23791892 23793389 ECH