Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02719 ATGACTGGACGTCCTCAGCCTCATGATCAGACCTCGCCTGCGTCCTCATCTTCCATCAGCAGCGATagaaatgtatttaatttgatcGCACGGAGAGAGATCTCACCTAGAGAAAAACACGTGCCAAAATGGCATTGGGGAGAAGCTTCTAAATTGAAATCTGGTTCTTGCTCTCGTCCTAAAAATGAAGTGGTGAGAAATGCAAGACGGGGTCTCCTCTCATGGGTTGAGGCAGGGTCATTGTGGCATTTGTCAGCCAAATATTGCCCATTGTTGCCACCCCCACGGTCTACTATTGCAGCAGCATTTAGTCCAGATGGAAAAGTGCTTGCCTCCACACATGGTGATCACACAGTAaagataattgattttgaaactGGTAGTTGCTTAAAGGTGTTAATTGGCCACAGGAGGACTCCTTGGGTGGTTAGGTTCCATCCGTTGCATCCACAAATACTGGCTAGTGGGAGTTTGGATCAAGAAGTTCGTTTATGGGATGCTAACACGTCAGAGTGCATAGTATCCCATCATTTCTATCGTCCCATTGCATCCATTGCATTCCATGCCAAAGGGGAAATACTAGCTGTTGCATCAGGCCACAAGCTATACATATGGCACTACAACAAGAGAGGTGAAGCATCCTCACCAACATTTGTGTTGAAAACAAGGCGTTCACTGCGGGCTGTGCATTTTCACCCACATGCTGCACCTTATCTTTTAACTGCCGAGGTCAATGATCTTGACTCCTCAGATTCATCAATGACTCAGGCAACATCCCTTGGTTATTTACAATATCCTCCACCAGCTGTTTTTGTCACAAATGTTCTTCCAAGGGAAAAGATTACTTTGCCAAGTGAAAATCCCTTTAtgtcatttccttttttcttcatgCCTTCATATACTGTAGATGACTCAAGAACAGAAATGGAGCATGCTGCTCATGATGTTGGTTCAGGTAGCATGCAAGTTGAATCTTCTCTCCCAGTGCAGTTTCAAGAGGATACAAATGCGACAGTGCAATATGATACTTCAGAGTCTCCGGTGGAGACATACTCTGAAATTCCCACTAGTTCTCAAACTGAGCCAGATGAAGGAAGCCAACATGGACACTCTACAGATGTCTATACTATGTTCAGTGATGAGCTGCATGGACAACCTCGACAAGCTATAGATCGTGAGGTTTTCTCTGACTTTAGTCAACTTCATGTTTTTCCTCCCAGAGACCAAAGTGGATGGCAATTCCTGCCTTTGCATGGACTGTTAATTGGTCCAAGCCAACAGAATGTTCCCTCAATGCTTCCTCGCGTGGGTGTTAGCCGTGACAGTCTAGCCCAACAGATGGTTTCTTCTGCCATAGCATCTAACCCCTCCACTCATAATTTTGAAGCAACAATGTTGTCTTCAGCAGTGCCTAGCAGCATCAGCACACCAGGAGGATCTGGGAGATCAGGTTTATGGCATTATTTTCCTCAATCCCGTGGGTCTTTGTCTGAATCTAGCAATCTTCCTGCATCTGTTAATGTTCCACATGATGGAACTGATATACAAACAATTATACATCGAATCCAATCAGAACTTGCCACCTCAGTGGCAGCTACTACTGCTGCAGAGCTGCCTTGCACTGTGAAGTTAAGAGTATGGTCGcatgatataaaatatccTTGTGCCCAACTGAATGCTGAAAGATGCCGCCTAACCATACCTCATGCTGTCCTCTGTAGTGAAATGGGGGCCCATTTTTCACCATGTGGTAGATTCTTAGCCGCATGTGTTGCATGTATGCTACCTCGTATAGAAGCTGATCCAGGATTACAAACTCTACTACACCAGGAGCCTGGAGCTGCAACATCTCCAACTCGACACCCAATCTCTGCACACCAAGTCATGTATGAGCTTCGCATATATTCCCTTGAGGAGGCAACATTTGGAACAGTGCTTGCATCACGGCCAATTAGAGCAGCTCATTGCCTGACCTCAATCCAGTTCTCACCCACATCTGAGCATATACTGCTTGCGTATGGTCGGCGTCATGGTTCTCTTCTCAGGACCATTGTCACTGATGGAGAAACAACATTACCTATTTATACAGTGTTAGAGGTGTACAGAGTCTCAGATATGAAACTTGTGATGGTACTCCCTAGTGCAGAGGATGAGGTCAACGTGGCATGTTTTCATCCTTTTGCAGGGGGAGGACTTGTTTATGGAACAAAGGAAGGAAAGCTAAGGGTCCTTCAGTATGATGGGGCTCACTCAATGAAGGGCACCGGATTAGGTTACTTACCTGAGGAAAATGTTGTCAGAGTCAGTCAGTG 2312 0.4446 MTGRPQPHDQTSPASSSSISSDRNVFNLIARREISPREKHVPKWHWGEASKLKSGSCSRPKNEVVRNARRGLLSWVEAGSLWHLSAKYCPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDFETGSCLKVLIGHRRTPWVVRFHPLHPQILASGSLDQEVRLWDANTSECIVSHHFYRPIASIAFHAKGEILAVASGHKLYIWHYNKRGEASSPTFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTQATSLGYLQYPPPAVFVTNVLPREKITLPSENPFMSFPFFFMPSYTVDDSRTEMEHAAHDVGSGSMQVESSLPVQFQEDTNATVQYDTSESPVETYSEIPTSSQTEPDEGSQHGHSTDVYTMFSDELHGQPRQAIDREVFSDFSQLHVFPPRDQSGWQFLPLHGLLIGPSQQNVPSMLPRVGVSRDSLAQQMVSSAIASNPSTHNFEATMLSSAVPSSISTPGGSGRSGLWHYFPQSRGSLSESSNLPASVNVPHDGTDIQTIIHRIQSELATSVAATTAAELPCTVKLRVWSHDIKYPCAQLNAERCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPRIEADPGLQTLLHQEPGAATSPTRHPISAHQVMYELRIYSLEEATFGTVLASRPIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLRTIVTDGETTLPIYTVLEVYRVSDMKLVMVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRVLQYDGAHSMKGTGLGYLPEENVVRVSQ 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02719 770 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 93 747 IPR011047 -
Bva04g02719 770 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 1 363 - -
Bva04g02719 770 ProSitePatterns Trp-Asp (WD) repeats signature. 153 167 IPR019775 -
Bva04g02719 770 ProSiteProfiles Trp-Asp (WD) repeats profile. 133 175 IPR001680 GO:0005515
Bva04g02719 770 SMART WD40_4 169 206 IPR001680 GO:0005515
Bva04g02719 770 SMART WD40_4 126 166 IPR001680 GO:0005515
Bva04g02719 770 SMART WD40_4 705 745 IPR001680 GO:0005515
Bva04g02719 770 SMART WD40_4 85 123 IPR001680 GO:0005515
Bva04g02719 770 MobiDBLite consensus disorder prediction 339 372 - -
Bva04g02719 770 Pfam WD domain, G-beta repeat 100 123 IPR001680 GO:0005515
Bva04g02719 770 Pfam WD domain, G-beta repeat 127 166 IPR001680 GO:0005515
Bva04g02719 770 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 360 769 - -
Bva04g02719 770 MobiDBLite consensus disorder prediction 1 22 - -
Bva04g02719 770 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 360 769 - -
Bva04g02719 770 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 133 171 - -
Bva04g02719 770 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 1 363 - -
Bva04g02719 770 Gene3D - 61 256 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02719 Bva-Chr4 23734384 23741495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02719 81 205 Miscellaneous Gene Families AT5G08390 32.061 2.89e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02719 - - gmx:100794246 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02719 04 23734384 23741495 Bva04g02719 04 23734384 23741495 ECH